Prediction of Human Organ Toxicity via Artificial Intelligence Methods.

Journal: Chemical research in toxicology
Published Date:

Abstract

Unpredicted human organ level toxicity remains one of the major reasons for drug clinical failure. There is a critical need for cost-efficient strategies in the early stages of drug development for human toxicity assessment. At present, artificial intelligence methods are popularly regarded as a promising solution in chemical toxicology. Thus, we provided comprehensive prediction models for eight significant human organ level toxicity end points using machine learning, deep learning, and transfer learning algorithms. In this work, our results showed that the graph-based deep learning approach was generally better than the conventional machine learning models, and good performances were observed for most of the human organ level toxicity end points in this study. In addition, we found that the transfer learning algorithm could improve model performance for skin sensitization end point using source domain of acute toxicity data and data of the Tox21 project. It can be concluded that our models can provide useful guidance for the rapid identification of the compounds with human organ level toxicity for drug discovery.

Authors

  • Yuxuan Hu
    Leon H. Charney Division of Cardiology, NYU Langone Health, New York, NY, USA.
  • Qiuhan Ren
    School of Science, China Pharmaceutical University, Nanjing 211198, China.
  • Xintong Liu
    State Key Laboratory of Natural Medicines, China Pharmaceutical University, Nanjing 210009, China.
  • Liming Gao
    School of Science, China Pharmaceutical University, Nanjing 211198, China.
  • Lecheng Xiao
    School of Pharmacy, China Pharmaceutical University, Nanjing 211198, China.
  • Wenying Yu
    School of Mechanical Engineering, Hebei University of Technology, Tianjin, P.R. China.