Microscopic Hyperspectral Image Classification Based on Fusion Transformer With Parallel CNN.

Journal: IEEE journal of biomedical and health informatics
Published Date:

Abstract

Microscopic hyperspectral image (MHSI) has received considerable attention in the medical field. The wealthy spectral information provides potentially powerful identification ability when combining with advanced convolutional neural network (CNN). However, for high-dimensional MHSI, the local connection of CNN makes it difficult to extract the long-range dependencies of spectral bands. Transformer overcomes this problem well because of its self-attention mechanism. Nevertheless, transformer is inferior to CNN in extracting spatial detailed features. Therefore, a classification framework integrating transformer and CNN in parallel, named as Fusion Transformer (FUST), is proposed for MHSI classification tasks. Specifically, the transformer branch is employed to extract the overall semantics and capture the long-range dependencies of spectral bands to highlight the key spectral information. The parallel CNN branch is designed to extract significant multiscale spatial features. Furthermore, the feature fusion module is developed to effectively fuse and process the features extracted by the two branches. Experimental results on three MHSI datasets demonstrate that the proposed FUST achieves superior performance when compared with state-of-the-art methods.

Authors

  • Weijia Zeng
  • Wei Li
    Department of Nephrology, The Second Affiliated Hospital of Guangxi Medical University, Nanning, Guangxi, China.
  • Mengmeng Zhang
  • Hao Wang
    Department of Cardiology, Second Medical Center, Chinese PLA General Hospital, Beijing, China.
  • Meng Lv
    State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.
  • Yue Yang
    Department of Nephrology, China-Japan Friendship Hospital, Beijing 100029, China.
  • Ran Tao
    Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, Maryland, USA.