Artificial Intelligence (AI)-Aided Structure Optimization for Enhanced Gene Delivery: The Effect of the Polymer Component Distribution (PCD).

Journal: ACS applied materials & interfaces
PMID:

Abstract

Gene therapy has emerged as a significant advancement in medicine in recent years. However, the development of effective gene delivery vectors, particularly polymer vectors, remains a significant challenge. Limited understanding of the internal structure of polymer vectors has hindered efforts to enhance their efficiency. This work focuses on investigating the impact of polymer structure on gene delivery, using the well-known polymeric vector poly(β-amino ester) (PAE) as a case study. For the first time, we revealed the distinct characteristics of individual polymer components and their synergistic effects-the appropriate combination of different components within a polymer (high MW and low MW components) on gene delivery. Additionally, artificial intelligence (AI) analysis was employed to decipher the relationship between the polymer component distribution (PCD) and gene transfection performance. Guided by this analysis, a series of highly efficient polymer vectors that outperform current commercial reagents such as jetPEI and Lipo3000 were developed, among which the transfection efficiency of the PAE-B1-based polyplex was approximately 1.5 times that of Lipo3000 and 2 times that of jetPEI in U251 cells.

Authors

  • Yinghao Li
  • Zhonglei He
    Charles Institute of Dermatology, School of Medicine, University College Dublin, Dublin D04 V1W8, Ireland.
  • Sigen A
    Charles Institute of Dermatology, School of Medicine, University College Dublin, Dublin D04 V1W8, Ireland.
  • Xianqing Wang
    Charles Institute of Dermatology, School of Medicine, University College Dublin, Dublin D04 V1W8, Ireland.
  • Zishan Li
    Charles Institute of Dermatology, School of Medicine, University College Dublin, Dublin D04 V1W8, Ireland.
  • Melissa Johnson
    Charles Institute of Dermatology, School of Medicine, University College Dublin, Dublin D04 V1W8, Ireland.
  • Ruth Foley
    Charles Institute of Dermatology, School of Medicine, University College Dublin, Dublin D04 V1W8, Ireland.
  • Irene Lara Sáez
    Charles Institute of Dermatology, School of Medicine, University College Dublin, Dublin D04 V1W8, Ireland.
  • Jing Lyu
    Department of Information Science and Technology, Nanjing Normal University Zhongbei College, Nanjing, Jiangsu 210046, China.
  • Wenxin Wang
    College of Life Science and Bio-Engineering, Beijing University of Technology, No. 100 Pingleyuan, Chaoyang District, Beijing 100124, China; Neusoft Medical System, Neusoft Beijing R&D Center, Zhongguancun Software Park 10, Xibeiwang East Road, Haidian District, Beijing 100194, China.