Enhancing the performance of premature ventricular contraction detection in unseen datasets through deep learning with denoise and contrast attention module.

Journal: Computers in biology and medicine
PMID:

Abstract

Premature ventricular contraction (PVC) is a common and harmless cardiac arrhythmia that can be asymptomatic or cause palpitations and chest pain in rare instances. However, frequent PVCs can lead to more serious arrhythmias, such as atrial fibrillation. Several PVC detection models have been proposed to enable early diagnosis of arrhythmias; however, they lack reliability and generalizability due to the variability of electrocardiograms across different settings and noise levels. Such weaknesses are known to aggravate with new data. Therefore, we present a deep learning model with a novel attention mechanism that can detect PVC accurately, even on unseen electrocardiograms with various noise levels. Our method, called the Denoise and Contrast Attention Module (DCAM), is a two-step process that denoises signals with a convolutional neural network (CNN) in the frequency domain and attends to differences. It focuses on differences in the morphologies and intervals of the remaining beats, mimicking how trained clinicians identify PVCs. Using three different encoder types, we evaluated 1D U-Net with DCAM on six external test datasets. The results showed that DCAM significantly improved the F1-score of PVC detection performance on all six external datasets and enhanced the performance of balancing both the sensitivity and precision of the models, demonstrating its robustness and generalization ability regardless of the encoder type. This demonstrates the need for a trainable denoising process before applying the attention mechanism. Our DCAM could contribute to the development of a reliable algorithm for cardiac arrhythmia detection under real clinical electrocardiograms.

Authors

  • Keewon Shin
    Department of Biomedical Engineering, Asan Medical Institute of Convergence Science and Technology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
  • Hyunjung Kim
    Department of Earth Resources and Environmental Engineering, Hanyang University, 222 Wangsimni-ro, Seongdong-gu, Seoul 04763, Republic of Korea. Electronic address: kshjkim@hanyang.ac.kr.
  • Woo-Young Seo
    Biomedical Engneering Research Center, Asan Medical Center, Seoul 05505, Korea.
  • Hyun-Seok Kim
    Section of Gastroenterology and Hepatology, Baylor College of Medicine, Houston, Texas.
  • Jae-Man Shin
    Department of Biomedical Engineering, University of Ulsan College of Medicine, Asan Medical Institute of Convergence Science and Technology, Asan Medical Center, Seoul, Korea.
  • Dong-Kyu Kim
    Department of Otorhinolaryngology-Head and Neck Surgery.
  • Yong-Seok Park
    Department of Anesthesiology and Pain Medicine, University of Ulsan College of Medicine, Asan Medical Center, Seoul, Korea.
  • Sung-Hoon Kim
    Asan Medical Center, Department of Anesthesiology and Pain Medicine, University of Ulsan College of Medicine, 88, Olympic-ro 43-gil, Seoul 05505, Korea.
  • Namkug Kim
    Department of Radiology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.