A deep learning LSTM-based approach for forecasting annual pollen curves: Olea and Urticaceae pollen types as a case study.

Journal: Computers in biology and medicine
PMID:

Abstract

Airborne pollen can trigger allergic rhinitis and other respiratory diseases in the synthesised population, which makes it one of the most relevant biological contaminants. Therefore, implementing accurate forecast systems is a priority for public health. The current forecast models are generally useful, but they falter when long time series of data are managed. The emergence of new computational techniques such as the LSTM algorithms could constitute a significant improvement for the pollen risk assessment. In this study, several LSTM variants were applied to forecast monthly pollen integrals in Málaga (southern Spain) using meteorological variables as predictors. Olea and Urticaceae pollen types were modelled as proxies of different annual pollen curves, using data from the period 1992-2022. The aims of this study were to determine the LSTM variants with the highest accuracy when forecasting monthly pollen integrals as well as to compare their performance with the traditional pollen forecast methods. The results showed that the CNN-LSTM were the most accurate when forecasting the monthly pollen integrals for both pollen types. Moreover, the traditional forecast methods were outperformed by all the LSTM variants. These findings highlight the importance of implementing LSTM models in pollen forecasting for public health and research applications.

Authors

  • Antonio Picornell
    Department of Botany and Plant Physiology, University of Malaga, Malaga 29071, Spain. Electronic address: picornell@uma.es.
  • Sandro Hurtado
    Dept. de Lenguajes y Ciencias de la Computación, ITIS Software, Universidad de Málaga, Málaga 29071, Spain. Electronic address: sandrohr@uma.es.
  • María Luisa Antequera-Gómez
    Dept. de Lenguajes y Ciencias de la Computación, ITIS Software, Universidad de Málaga, Málaga 29071, Spain. Electronic address: marialan@uma.es.
  • Cristóbal Barba-González
    Dept. de Lenguajes y Ciencias de la Computación, ITIS Software, Universidad de Málaga, Málaga 29071, Spain. Electronic address: cbarba@uma.es.
  • Rocío Ruiz-Mata
    Department of Botany and Plant Physiology, University of Malaga, Malaga 29071, Spain. Electronic address: roruizmata@uma.es.
  • Enrique de Gálvez-Montañez
    Department of Botany and Plant Physiology, University of Malaga, Malaga 29071, Spain. Electronic address: kikedegalvez@uma.es.
  • Marta Recio
    Department of Botany and Plant Physiology, University of Malaga, Malaga 29071, Spain. Electronic address: martarc@uma.es.
  • María Del Mar Trigo
    Department of Botany and Plant Physiology, University of Malaga, Malaga 29071, Spain. Electronic address: aerox@uma.es.
  • José F Aldana-Montes
    Ada Byron Research Center, University of Malaga, Ampliación del Campus de Teatinos, Málaga, Spain.
  • Ismael Navas-Delgado
    ITIS Software, Universidad de Málaga, Arquitecto Francisco Peñalosa 18, Malaga, 29071, Spain; Biomedical Research Institute of Málaga (IBIMA), Universidad de Málaga, Malaga, Spain; Departamento de Lenguajes y Ciencias de la Computación, Universidad de Málaga, Malaga, Spain. Electronic address: ismael@uma.es.