Autonomous assembly and disassembly of gliding molecular robots regulated by a DNA-based molecular controller.

Journal: Science advances
PMID:

Abstract

In recent years, there has been a growing interest in engineering dynamic and autonomous systems with robotic functionalities using biomolecules. Specifically, the ability of molecular motors to convert chemical energy to mechanical forces and the programmability of DNA are regarded as promising components for these systems. However, current systems rely on the manual addition of external stimuli, limiting the potential for autonomous molecular systems. Here, we show that DNA-based cascade reactions can act as a molecular controller that drives the autonomous assembly and disassembly of DNA-functionalized microtubules propelled by kinesins. The DNA controller is designed to produce two different DNA strands that program the interaction between the microtubules. The gliding microtubules integrated with the controller autonomously assemble to bundle-like structures and disassemble into discrete filaments without external stimuli, which is observable by fluorescence microscopy. We believe this approach to be a starting point toward more autonomous behavior of motor protein-based multicomponent systems with robotic functionalities.

Authors

  • Ibuki Kawamata
    Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan.
  • Kohei Nishiyama
    Graduate School of Chemical Sciences and Engineering, Hokkaido University, Sapporo 060-0810, Japan.
  • Daiki Matsumoto
    Graduate School of Engineering, Tohoku University, Sendai 980-8579, Japan.
  • Shosei Ichiseki
    Graduate School of Engineering, Tohoku University, Sendai 980-8579, Japan.
  • Jakia J Keya
    Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan.
  • Kohei Okuyama
    Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan.
  • Masatoshi Ichikawa
    Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan.
  • Arif Md Rashedul Kabir
    Faculty of Science, Hokkaido University, Sapporo, Japan.
  • Yusuke Sato
    Graduate School of Radiological Technology, Gunma Prefectural College of Health Sciences, Maebashi, Japan.
  • Daisuke Inoue
    Faculty of Design, Kyushu University, Fukuoka 815-8540, Japan.
  • Satoshi Murata
    Department of Surgery, Shiga University of Medical Science, Otsu, Shiga, Japan.
  • Kazuki Sada
    Graduate School of Chemical Sciences and Engineering, Hokkaido University, Sapporo 060-0810, Japan.
  • Akira Kakugo
    Faculty of Science, Hokkaido University, Sapporo, Japan. kakugo@sci.hokudai.ac.jp.
  • Shin-Ichiro M Nomura
    Graduate School of Engineering, Tohoku University, Sendai 980-8579, Japan.