LUNet: deep learning for the segmentation of arterioles and venules in high resolution fundus images.

Journal: Physiological measurement
Published Date:

Abstract

This study aims to automate the segmentation of retinal arterioles and venules (A/V) from digital fundus images (DFI), as changes in the spatial distribution of retinal microvasculature are indicative of cardiovascular diseases, positioning the eyes as windows to cardiovascular health.We utilized active learning to create a new DFI dataset with 240 crowd-sourced manual A/V segmentations performed by 15 medical students and reviewed by an ophthalmologist. We then developed LUNet, a novel deep learning architecture optimized for high-resolution A/V segmentation. The LUNet model features a double dilated convolutional block to widen the receptive field and reduce parameter count, alongside a high-resolution tail to refine segmentation details. A custom loss function was designed to prioritize the continuity of blood vessel segmentation.LUNet significantly outperformed three benchmark A/V segmentation algorithms both on a local test set and on four external test sets that simulated variations in ethnicity, comorbidities and annotators.The release of the new datasets and the LUNet model (www.aimlab-technion.com/lirot-ai) provides a valuable resource for the advancement of retinal microvasculature analysis. The improvements in A/V segmentation accuracy highlight LUNet's potential as a robust tool for diagnosing and understanding cardiovascular diseases through retinal imaging.

Authors

  • Jonathan Fhima
    Faculty of Biomedical Engineering, Technion-IIT, Haifa, Israel.
  • Jan Van Eijgen
    Research Group of Ophthalmology, Department of Neurosciences, KU Leuven, Oude Markt 13, 3000 Leuven; Department of Ophthalmology, University Hospitals UZ Leuven, Herestraat 49, 3000 Leuven, Belgium.
  • Marie-Isaline Billen Moulin-Romsée
    Research Group of Ophthalmology, Department of Neurosciences, KU Leuven, Leuven, Belgium.
  • Heloïse Brackenier
    Research Group of Ophthalmology, Department of Neurosciences, KU Leuven, Leuven, Belgium.
  • Hana Kulenovic
    Research Group of Ophthalmology, Department of Neurosciences, KU Leuven, Leuven, Belgium.
  • Valérie Debeuf
    Research Group of Ophthalmology, Department of Neurosciences, KU Leuven, Leuven, Belgium.
  • Marie Vangilbergen
    Research Group of Ophthalmology, Department of Neurosciences, KU Leuven, Leuven, Belgium.
  • Moti Freiman
    Philips Medical Systems Technologies Ltd., Advanced Technologies Center, Haifa, 3100202, Israel.
  • Ingeborg Stalmans
    Research Group Ophthalmology, KU Leuven, Kapucijnenvoer 33, 3000 Leuven, Belgium.
  • Joachim A Behar
    Faculty of Biomedical Engineering, Technion, Israel Institute of Technology, Haifa, Israel.