Perspectives on the use of machine learning for ADME prediction at AstraZeneca.

Journal: Xenobiotica; the fate of foreign compounds in biological systems
Published Date:

Abstract

A drug's pharmacokinetic (PK) profile will determine its dose and the frequency of administration as well as the likelihood of observing any adverse drug reactions.It is important to understand these PK properties as early as possible in the drug discovery process, ideally, to accurately predict these prior to synthesising the molecule leading to significant improvements in efficiency.In this paper, we describe the approaches used within AstraZeneca to improve our ability of predicting the preclinical and human pharmacokinetic profiles of novel molecules using machine learning and artificial intelligence.We will show how combining chemical structure-based approaches with experimentally derived properties enables improved predictions of pharmacokinetics and can be extended to molecules that go beyond the classical Lipinski's rule-of-five space.We will also discuss how combining these and predictive models could ultimately improve our ability to predict the human outcome at the point of chemical design.

Authors

  • Erik Gawehn
    Swiss Federal Institute of Technology (ETH), Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 4, CH-8093 Zurich, Switzerland, Fax: +41 44 633 13 79, Tel: +41 44 633 74 38.
  • Nigel Greene
    Data Science and AI, Imaging and Data Analytics, Clinical Pharmacology & Safety Sciences, R&D, AstraZeneca, Waltham, Massachusetts 02451, United States.
  • Filip Miljković
    Department of Life Science Informatics, B-IT, LIMES Program Unit Chemical Biology and Medicinal Chemistry, Rheinische Friedrich-Wilhelms-Universität, Endenicher Allee 19c, D-53115 Bonn, Germany.
  • Olga Obrezanova
    Data Science and AI, Imaging and Data Analytics, Clinical Pharmacology & Safety Sciences, R&D, AstraZeneca, Cambridge CB4 0FZ, U.K.
  • Vigneshwari Subramanian
    Imaging and Data Analytics, Clinical Pharmacology & Safety Sciences, R&D, AstraZeneca, Pepparedsleden 1, 43183, Göteborg, Sweden.
  • Maria-Anna Trapotsi
    Centre for Molecular Informatics, Yusuf Hamied Department of Chemistry, University of Cambridge UK ab454@cam.ac.uk.
  • Susanne Winiwarter
    Drug Metabolism and Pharmacokinetics, Research and Early Development, Cardiovascular, Renal and Metabolism (CVRM), Biopharmaceutical R&D, AstraZeneca, Gothenburg SE-43183, Sweden.