Deep learning for intracranial aneurysm segmentation using CT angiography.

Journal: Physics in medicine and biology
Published Date:

Abstract

This study aimed to employ a two-stage deep learning method to accurately detect small aneurysms (4-10 mm in size) in computed tomography angiography images.This study included 956 patients from 6 hospitals and a public dataset obtained with 6 CT scanners from different manufacturers. The proposed method consists of two components: a lightweight and fast head region selection (HRS) algorithm and an adaptive 3D nnU-Net network, which is used as the main architecture for segmenting aneurysms. Segments generated by the deep neural network were compared with expert-generated manual segmentation results and assessed using Dice scores.The area under the curve (AUC) exceeded 79% across all datasets. In particular, the precision and AUC reached 85.2% and 87.6%, respectively, on certain datasets. The experimental results demonstrated the promising performance of this approach, which reduced the inference time by more than 50% compared to direct inference without HRS.Compared with a model without HRS, the deep learning approach we developed can accurately segment aneurysms by automatically localizing brain regions and can accelerate aneurysm inference by more than 50%.

Authors

  • Huizhong Zheng
    Lauterbur Research Center for Biomedical Imaging, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, People's Republic of China.
  • Xinfeng Liu
    Department of Radiology, Guizhou Provincial People's Hospital, Guiyang, 550002 China.
  • Zhenxing Huang
    Lauterbur Research Center for Biomedical Imaging, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055 China.
  • Yan Ren
    b Department of Traditional Chinese Medicine, College of Pharmacy , Southwest Minzu University , Chengdu , China.
  • Bin Fu
    Department of Orthopaedic Surgery, Changzhou Wujin People's Hospital, Changzhou 213100, China.
  • Tianliang Shi
    Department of Radiology, Tongren Municipal People's Hospital, Tongren, Guizhou 554300, People's Republic of China.
  • Lu Liu
    College of Pharmacy, Harbin Medical University, Harbin, China.
  • Qiping Guo
    Department of Radiology, Xingyi Municipal People's Hospital, Xingyi, Guizhou 562400, People's Republic of China.
  • Chong Tian
    School of Computer Science and Engineering, Sun Yat-sen University, Guangzhou, China.
  • Dong Liang
    Lauterbur Research Center for Biomedical Imaging, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055 China.
  • Rongpin Wang
    Department of Radiology, Guizhou Provincial People's Hospital, Guiyang, 550002 China.
  • Jie Chen
    School of Basic Medical Sciences, Health Science Center, Ningbo University, Ningbo, China.
  • Zhanli Hu
    Lauterbur Research Center for Biomedical Imaging, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055 China.