AI driven analysis of MRI to measure health and disease progression in FSHD.

Journal: Scientific reports
Published Date:

Abstract

Facioscapulohumeral muscular dystrophy (FSHD) affects roughly 1 in 7500 individuals. While at the population level there is a general pattern of affected muscles, there is substantial heterogeneity in muscle expression across- and within-patients. There can also be substantial variation in the pattern of fat and water signal intensity within a single muscle. While quantifying individual muscles across their full length using magnetic resonance imaging (MRI) represents the optimal approach to follow disease progression and evaluate therapeutic response, the ability to automate this process has been limited. The goal of this work was to develop and optimize an artificial intelligence-based image segmentation approach to comprehensively measure muscle volume, fat fraction, fat fraction distribution, and elevated short-tau inversion recovery signal in the musculature of patients with FSHD. Intra-rater, inter-rater, and scan-rescan analyses demonstrated that the developed methods are robust and precise. Representative cases and derived metrics of volume, cross-sectional area, and 3D pixel-maps demonstrate unique intramuscular patterns of disease. Future work focuses on leveraging these AI methods to include upper body output and aggregating individual muscle data across studies to determine best-fit models for characterizing progression and monitoring therapeutic modulation of MRI biomarkers.

Authors

  • Lara Riem
    Springbok Analytics, Charlottesville, VA, USA. lara.riem@springbokanalytics.com.
  • Olivia DuCharme
    Springbok Analytics, Charlottesville, VA, USA.
  • Matthew Cousins
    Springbok Analytics, Charlottesville, VA, USA.
  • Xue Feng
    Department of Radiology and Medical Imaging, University of Virginia, Charlottesville, Virginia.
  • Allison Kenney
    Springbok Analytics, 110 Old Preston Ave., Charlottesville, VA, 22902, USA.
  • Jacob Morris
    Springbok Analytics, 110 Old Preston Ave., Charlottesville, VA, 22902, USA.
  • Stephen J Tapscott
    Fred Hutchinson Cancer Center, Seattle, WA, USA.
  • Rabi Tawil
    University of Rochester Medical Center, Rochester, NY, USA.
  • Jeff Statland
    University of Kansas Medical Center, Kansas City, KS, USA.
  • Dennis Shaw
    Seattle Children's Hospital, Seattle, WA, USA.
  • Leo Wang
    University of Washington, Seattle, WA, USA.
  • Michaela Walker
    University of Kansas Medical Center, Kansas City, KS, USA.
  • Leann Lewis
    University of Rochester Medical Center, Rochester, NY, USA.
  • Michael A Jacobs
    The Russell H. Morgan Department of Radiology and Radiological Sciences, Johns Hopkins University School of Medicine, Baltimore, MD.
  • Doris G Leung
    Kennedy Krieger Institute, Baltimore, MD, USA.
  • Seth D Friedman
    Seattle Children's Hospital, Seattle, WA, USA.
  • Silvia S Blemker
    2 Department of Biomedical Engineering, University of Virginia, Charlottesville, VA, USA.