Ensemble and optimization algorithm in support vector machines for classification of wheat genotypes.

Journal: Scientific reports
PMID:

Abstract

This study aimed to classifying wheat genotypes using support vector machines (SVMs) improved with ensemble algorithms and optimization techniques. Utilizing data from 302 wheat genotypes and 14 morphological attributes to evaluate six SVM kernels: linear, radial basis function (RBF), sigmoid, and polynomial degrees 1-3. Various optimization methods, including grid search, random search, genetic algorithms, differential evolution, and particle swarm optimization, were used. The radial basis function kernel achieves the highest accuracy at 93.2%, and the weighted accuracy ensemble further improves it to 94.9%. This study shows the effectiveness of these methods in agricultural research and crop improvement. Notably, optimization-based SVM classification, particularly with particle swarm optimization, saw a significant 1.7% accuracy gain in the test set, reaching 94.9% accuracy. These findings underscore the efficacy of RBF kernels and optimization techniques in improving wheat genotype classification accuracy and highlight the potential of SVMs in agricultural research and crop improvement endeavors.

Authors

  • Mujahid Khan
    Agricultural Research Station (SKNAU, Jobner), Fatehpur-Shekhawati, Sikar, 332301, India.
  • B K Hooda
    Department of Mathematics and Statistics, Chaudhary Charan Singh Haryana Agricultural University, Hisar, Haryana, 125004, India.
  • Arpit Gaur
    Department of Genetics and Plant Breeding, Chaudhary Charan Singh Haryana Agricultural University, Hisar, Haryana, 125004, India.
  • Vikram Singh
    All India Institute of Medical Sciences Jodhpur, Jodhpur, India.
  • Yogesh Jindal
    Department of Genetics and Plant Breeding, Chaudhary Charan Singh Haryana Agricultural University, Hisar, Haryana, 125004, India.
  • Hemender Tanwar
    Department of Seed Science and Technology, Chaudhary Charan Singh Haryana Agricultural University, Hisar, Haryana, 125004, India.
  • Sushma Sharma
    Department of Seed Science and Technology, Chaudhary Charan Singh Haryana Agricultural University, Hisar, Haryana, 125004, India.
  • Sonia Sheoran
    ICAR-Indian Institute of Wheat and Barley, Karnal, Haryana, 132001, India.
  • Dinesh Kumar Vishwakarma
    Biometric Research Laboratory, Department of Information Technology, Delhi Technological University, Bawana Road, Delhi, 110042, India.
  • Mohammad Khalid
    Bioactive Research Laboratory, Faculty of Pharmacy, Integral University, Uttar Pradesh, India.
  • Ghadah Shukri Albakri
    Department of Teaching and Learning, College of Education and Human Development, Princess Nourah Bint Abdulrahman University, P.O. Box 84428, 11671, Riyadh, Saudi Arabia.
  • Maha Awjan Alreshidi
    Department of Chemistry, University of Ha'il, 81441, Ha'il, Saudi Arabia.
  • Jeong Ryeol Choi
    School of Electronic Engineering, Kyonggi University, Yeongtong-gu, Suwon, Gyeonggi-do, 16227, Republic of Korea. choiardor@hanmail.net.
  • Krishna Kumar Yadav
    Faculty of Science and Technology, Madhyanchal Professional University, Ratibad, Bhopal, 462044, India.