Can Machine Learning Overcome the 95% Failure Rate and Reality that Only 30% of Approved Cancer Drugs Meaningfully Extend Patient Survival?

Journal: Journal of medicinal chemistry
Published Date:

Abstract

Despite implementing hundreds of strategies, cancer drug development suffers from a 95% failure rate over 30 years, with only 30% of approved cancer drugs extending patient survival beyond 2.5 months. Adding more criteria without eliminating nonessential ones is impractical and may fall into the "survivorship bias" trap. Machine learning (ML) models may enhance efficiency by saving time and cost. Yet, they may not improve success rate without identifying the root causes of failure. We propose a "STAR-guided ML system" (structure-tissue/cell selectivity-activity relationship) to enhance success rate and efficiency by addressing three overlooked interdependent factors: potency/specificity to the on/off-targets determining efficacy in tumors at clinical doses, on/off-target-driven tissue/cell selectivity influencing adverse effects in the normal organs at clinical doses, and optimal clinical doses balancing efficacy/safety as determined by potency/specificity and tissue/cell selectivity. STAR-guided ML models can directly predict clinical dose/efficacy/safety from five features to design/select the best drugs, enhancing success and efficiency of cancer drug development.

Authors

  • Duxin Sun
    Department of Pharmaceutical Sciences, College of Pharmacy, University of Michigan, Ann Arbor, MI, 48109, United States. duxins@umich.edu.
  • Christian Macedonia
    Lancaster Life Science Group, Lancaster, Pennsylvania 17601, United States.
  • Zhigang Chen
    The State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, #7 Jinsui Road, Guangzhou, Guangdong 510230, China.
  • Sriram Chandrasekaran
    Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA.
  • Kayvan Najarian
  • Simon Zhou
    Aurinia Pharmaceuticals Inc., Rockville, Maryland 20850, United States.
  • Tim Cernak
    Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States.
  • Vicki L Ellingrod
  • H V Jagadish
  • Bernard Marini
  • Manjunath Pai
  • Angela Violi
    Department of Mechanical Engineering.
  • Jason C Rech
  • Shaomeng Wang
  • Yan Li
    Interdisciplinary Research Center for Biology and Chemistry, Liaoning Normal University, Dalian, China.
  • Brian Athey
    University of Michigan Medical School, Ann Arbor, MI, 48109, USA.
  • Gilbert S Omenn