Semantic-spatial feature-fused cortical surface parcellation: a scale-unified spatial learning network with boundary contrastive loss.

Journal: Medical & biological engineering & computing
PMID:

Abstract

The cortical surface parcellation provides prior guidance for studying mental disorders and human cognition. Graph neural networks (GNNs) have gained popularity in this task to preserve its spatial structure. However, previous GNNs struggled to effectively exploit the information contained in the complex spatial structure of the cortical surface and generally encountered an uneven node distribution issue. Meanwhile, labeling boundary nodes was also identified as a widespread problem in this task. Accordingly, this paper develops a scale-unified spatial learning network with a boundary contrastive loss (SSLNet) for cortical surface parcellation. Its core is the scale-unified spatial learning module. It devises neighbor feature extraction and aggregation strategies by fully integrating spatial coordinates and semantic structure to learn effective spatial features of local neighborhoods. More importantly, spatial scale unification is incorporated into this module to mitigate the negative effect on spatial learning caused by node distribution differences among local areas. Additionally, a universal boundary contrastive loss is constructed, enhancing the feature discriminability of boundary nodes by constraining them to be close to the same class nodes and apart from different class nodes in the feature space. It considerably improves boundary performance without increasing parameters or changing the network structure. Experiments regarding public Mindboggle demonstrate that the dice score and accuracy of SSLNet achieve and , respectively, surpassing existing methods.

Authors

  • Hailiang Ye
    Department of Mathematics and Information Sciences, China Jiliang University, Hangzhou 310018, Zhejiang Province, PR China. Electronic address: yhl575@163.com.
  • Siqi Liu
    National University of Singapore Graduate School for Integrative Sciences and Engineering, National University of Singapore, Singapore, Singapore.
  • Ming Li
    Radiology Department, Huadong Hospital, Affiliated with Fudan University, Shanghai, China.
  • Houying Zhu
    School of Mathematical and Physical Sciences, Macquarie University, Sydney, NSW, Australia.
  • Feilong Cao
    Department of Mathematics and Information Sciences, China Jiliang University, Hangzhou 310018, Zhejiang Province, PR China. Electronic address: feilongcao@gmail.com.