GARNN: An interpretable graph attentive recurrent neural network for predicting blood glucose levels via multivariate time series.

Journal: Neural networks : the official journal of the International Neural Network Society
PMID:

Abstract

Accurate prediction of future blood glucose (BG) levels can effectively improve BG management for people living with type 1 or 2 diabetes, thereby reducing complications and improving quality of life. The state of the art of BG prediction has been achieved by leveraging advanced deep learning methods to model multimodal data, i.e., sensor data and self-reported event data, organized as multi-variate time series (MTS). However, these methods are mostly regarded as "black boxes" and not entirely trusted by clinicians and patients. In this paper, we propose interpretable graph attentive recurrent neural networks (GARNNs) to model MTS, explaining variable contributions via summarizing variable importance and generating feature maps by graph attention mechanisms instead of post-hoc analysis. We evaluate GARNNs on four datasets, representing diverse clinical scenarios. Upon comparison with fifteen well-established baseline methods, GARNNs not only achieve the best prediction accuracy but also provide high-quality temporal interpretability, in particular for postprandial glucose levels as a result of corresponding meal intake and insulin injection. These findings underline the potential of GARNN as a robust tool for improving diabetes care, bridging the gap between deep learning technology and real-world healthcare solutions.

Authors

  • Chengzhe Piao
  • Taiyu Zhu
  • Stephanie E Baldeweg
    Department of Diabetes and Endocrinology, University College London Hospitals, London, UK.
  • Paul Taylor
    London, United Kingdom.
  • Pantelis Georgiou
  • Jiahao Sun
    Key Laboratory of Organic Optoelectronics & Molecular Engineering of the Ministry of Education, Department of Chemistry, Tsinghua University, Beijing, 100084, China.
  • Jun Wang
    Department of Speech, Language, and Hearing Sciences and the Department of Neurology, The University of Texas at Austin, Austin, TX 78712, USA.
  • Kezhi Li