Neural Network-Enabled Multiparametric Impedance Signal Templating for High throughput Single-Cell Deformability Cytometry Under Viscoelastic Extensional Flows.

Journal: Small (Weinheim an der Bergstrasse, Germany)
PMID:

Abstract

Cellular biophysical metrics exhibit systematic alterations during processes, such as metastasis and immune cell activation, which can be used to identify and separate live cell subpopulations for targeting drug screening. Image-based biophysical cytometry under extensional flows can accurately quantify cell deformability based on cell shape alterations but needs extensive image reconstruction, which limits its inline utilization to activate cell sorting. Impedance cytometry can measure these cell shape alterations based on electric field screening, while its frequency response offers functional information on cell viability and interior structure, which are difficult to discern by imaging. Furthermore, 1-D temporal impedance signal trains exhibit characteristic shapes that can be rapidly templated in near real-time to extract single-cell biophysical metrics to activate sorting. We present a multilayer perceptron neural network signal templating approach that utilizes raw impedance signals from cells under extensional flow, alongside its training with image metrics from corresponding cells to derive net electrical anisotropy metrics that quantify cell deformability over wide anisotropy ranges and with minimal errors from cell size distributions. Deformability and electrical physiology metrics are applied in conjunction on the same cell for multiparametric classification of live pancreatic cancer cells versus cancer associated fibroblasts using the support vector machine model.

Authors

  • Javad Jarmoshti
    Electrical & Computer Engineering, University of Virginia, Charlottesville, VA, 22904, USA.
  • Abdullah-Bin Siddique
    Electrical & Computer Engineering, University of Virginia, Charlottesville, VA, 22904, USA.
  • Aditya Rane
    Chemistry, University of Virginia, University of Virginia, Charlottesville, VA, 22904, USA.
  • Shaghayegh Mirhosseini
    Electrical & Computer Engineering, University of Virginia, Charlottesville, VA, 22904, USA.
  • Sara J Adair
    Surgery, School of Medicine, University of Virginia, Charlottesville, VA, 22903, USA.
  • Todd W Bauer
    School of Medicine, University of Virginia, 1215 Lee St, Charlottesville, VA 22903 USA.
  • Federica Caselli
    Department of Civil Engineering and Computer Science, University of Rome Tor Vergata, Rome, Italy.
  • Nathan S Swami
    Department of Electrical and Computer Engineering, University of Virginia, Charlottesville, VA, 22904, USA. nswami@virginia.edu.