Near-lossless EEG signal compression using a convolutional autoencoder: Case study for 256-channel binocular rivalry dataset.

Journal: Computers in biology and medicine
PMID:

Abstract

Electroencephalography (EEG) experiments typically generate vast amounts of data due to the high sampling rates and the use of multiple electrodes to capture brain activity. Consequently, storing and transmitting these large datasets is challenging, necessitating the creation of specialized compression techniques tailored to this data type. This study proposes one such method, which at its core uses an artificial neural network (specifically a convolutional autoencoder) to learn the latent representations of modelled EEG signals to perform lossy compression, which gets further improved with lossless corrections based on the user-defined threshold for the maximum tolerable amplitude loss, resulting in a flexible near-lossless compression scheme. To test the viability of our approach, a case study was performed on the 256-channel binocular rivalry dataset, which also describes mostly data-specific statistical analyses and preprocessing steps. Compression results, evaluation metrics, and comparisons with baseline general compression methods suggest that the proposed method can achieve substantial compression results and speed, making it one of the potential research topics for follow-up studies.

Authors

  • Martin Kukrál
    Faculty of Applied Sciences, University of West Bohemia in Pilsen, Pilsen, 301 00, Czech Republic. Electronic address: kukrma@students.zcu.cz.
  • Duc Thien Pham
    Faculty of Applied Sciences, University of West Bohemia in Pilsen, Pilsen, 301 00, Czech Republic. Electronic address: ducthien@kiv.zcu.cz.
  • Josef Kohout
    Faculty of Applied Sciences, University of West Bohemia in Pilsen, Pilsen, 301 00, Czech Republic. Electronic address: besoft@ntis.zcu.cz.
  • Štefan Kohek
    Faculty of Electrical Engineering and Computer Science, University of Maribor, Maribor, 2000, Slovenia. Electronic address: stefan.kohek@um.si.
  • Marek Havlík
    National Institute of Mental Health, Klecany, 250 67, Czech Republic. Electronic address: marek.havlik@nudz.cz.
  • Dominika Grygarová
    National Institute of Mental Health, Klecany, 250 67, Czech Republic. Electronic address: dominika.grygarova@nudz.cz.