A Novel Linear Machine Learning Method Based on DNA Hybridization Reaction Circuit.

Journal: IEEE transactions on nanobioscience
Published Date:

Abstract

DNA hybridization reaction is a significant technology in the field of semi-synthetic biology and holds great potential for use in biological computation. In this study, we propose a novel machine learning model based on a DNA hybridization reaction circuit. This circuit comprises a computation training component, a test component, and a learning algorithm. Compared to conventional machine learning models based on semiconductors, the proposed machine learning model harnesses the power of DNA hybridization reaction, with the learning algorithm implemented based on the unique properties of DNA computation, enabling parallel computation for the acquisition of learning results. In contrast to existing machine learning models based on DNA circuits, our proposed model constitutes a complete synthetic biology computation system, and utilizes the "dual-rail" mechanism to achieve the DNA compilation of the learning algorithm, which allows the weights to be updated to negative values. The proposed machine learning model based on DNA hybridization reaction demonstrates the ability to predict and fit linear functions. As such, this study is expected to make significant contributions to the development of machine learning through DNA hybridization reaction circuits.

Authors

  • Chengye Zou
    School of Mathematics and Statistics, Anyang Normal University, Anyang 455000, China.
  • Qiang Zhang
    Yunan Provincial Center for Disease Control and Prevention, Kunming 650022, China.
  • Bin Wang
    State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling 712100, China; New South Wales Department of Primary Industries, Wagga Wagga Agricultural Institute, Wagga Wagga 2650, Australia. Electronic address: bin.a.wang@dpi.nsw.gov.au.
  • Changjun Zhou
    College of Computer Science and Engineering, Dalian Minzu University, Dalian, China.
  • Yongwei Yang
    Department of Radiology, the Second Affiliated Hospital of Chongqing Medical University, Yuzhong District, No. 74 Linjiang Rd, Chongqing, 400010, China.
  • Xuncai Zhang
    College of Electrical and Information Engineering, Zhengzhou University of Light Industry, Zhengzhou 450002, China.