Parsing clinical text: how good are the state-of-the-art parsers?

Journal: BMC medical informatics and decision making
Published Date:

Abstract

BACKGROUND: Parsing, which generates a syntactic structure of a sentence (a parse tree), is a critical component of natural language processing (NLP) research in any domain including medicine. Although parsers developed in the general English domain, such as the Stanford parser, have been applied to clinical text, there are no formal evaluations and comparisons of their performance in the medical domain.

Authors

  • Min Jiang
    Eli Lilly and Company, Indianapolis, IN, United States.
  • Yang Huang
    School of Computer and Electronic Information, Nanjing Normal University, Nanjing 210023, China.
  • Jung-wei Fan
  • Buzhou Tang
  • Josh Denny
  • Hua Xu
    Department of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.