CompGO: an R package for comparing and visualizing Gene Ontology enrichment differences between DNA binding experiments.

Journal: BMC bioinformatics
Published Date: Sep 2, 2015

Abstract

BACKGROUND: Gene ontology (GO) enrichment is commonly used for inferring biological meaning from systems biology experiments. However, determining differential GO and pathway enrichment between DNA-binding experiments or using the GO structure to classify experiments has received little attention.

Authors

  • Ashley J Waardenberg
    Victor Chang Cardiac Research Institute, Darlinghurst, NSW, 2010, Australia. awaardenberg@cmri.org.au.
  • Maya Bassett
    Victor Chang Cardiac Research Institute, Darlinghurst, NSW, 2010, Australia. sam.d.bassett@gmail.com.
  • Romaric Bouveret
    Victor Chang Cardiac Research Institute, Darlinghurst, NSW, 2010, Australia. r.bouveret@victorchang.edu.au.
  • Richard P Harvey
    Victor Chang Cardiac Research Institute, Darlinghurst, NSW, 2010, Australia. r.harvey@victorchang.edu.au.

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