The Orthology Ontology: development and applications.

Journal: Journal of biomedical semantics
Published Date:

Abstract

BACKGROUND: Computational comparative analysis of multiple genomes provides valuable opportunities to biomedical research. In particular, orthology analysis can play a central role in comparative genomics; it guides establishing evolutionary relations among genes of organisms and allows functional inference of gene products. However, the wide variations in current orthology databases necessitate the research toward the shareability of the content that is generated by different tools and stored in different structures. Exchanging the content with other research communities requires making the meaning of the content explicit.

Authors

  • Jesualdo Tomás Fernández-Breis
    Faculty of Computer Science, Universidad de Murcia, IMIB-Arrixaca, Spain.
  • Hirokazu Chiba
    Laboratory of Genome Informatics, National Institute for Basic Biology, National Institutes of Natural Sciences, Okazaki, Aichi, Japan.
  • María del Carmen Legaz-García
    Faculty of Computer Science, Universidad de Murcia, IMIB-Arrixaca, Spain.
  • Ikuo Uchiyama
    Laboratory of Genome Informatics, National Institute for Basic Biology, National Institutes of Natural Sciences, Okazaki, Aichi, Japan; Data Integration and Analysis Facility, National Institute for Basic Biology, National Institutes of Natural Sciences, Okazaki, Aichi, Japan.