Synergies Between Quantum Mechanics and Machine Learning in Reaction Prediction.

Journal: Journal of chemical information and modeling
Published Date:

Abstract

Machine learning (ML) and quantum mechanical (QM) methods can be used in two-way synergy to build chemical reaction expert systems. The proposed ML approach identifies electron sources and sinks among reactants and then ranks all source-sink pairs. This addresses a bottleneck of QM calculations by providing a prioritized list of mechanistic reaction steps. QM modeling can then be used to compute the transition states and activation energies of the top-ranked reactions, providing additional or improved examples of ranked source-sink pairs. Retraining the ML model closes the loop, producing more accurate predictions from a larger training set. The approach is demonstrated in detail using a small set of organic radical reactions.

Authors

  • Peter Sadowski
    Department of Computer Science, University of California, Irvine, Irvine, CA 92697-3435, USA. Electronic address: psadowsk@uci.edu.
  • David Fooshee
    University of California, Irvine , Department of Computer Science, Irvine, California 92697, United States.
  • Niranjan Subrahmanya
    ExxonMobil Research and Engineering , Annandale, New Jersey 08801, United States.
  • Pierre Baldi
    Department of Computer Science, Department of Biological Chemistry, University of California-Irvine, Irvine, CA 92697, USA.