Ontological interpretation of biomedical database content.

Journal: Journal of biomedical semantics
Published Date:

Abstract

BACKGROUND: Biological databases store data about laboratory experiments, together with semantic annotations, in order to support data aggregation and retrieval. The exact meaning of such annotations in the context of a database record is often ambiguous. We address this problem by grounding implicit and explicit database content in a formal-ontological framework.

Authors

  • Filipe Santana da Silva
    Centro de Informática, Universidade Federal de Pernambuco, Av. Jornalista Anibal Fernandes, 50.740-560, Recife, Brazil.
  • Ludger Jansen
    Institut für Philosophie, Universität Rostock, D-18051, Rostock, Germany.
  • Fred Freitas
    Centro de Informática, Universidade Federal de Pernambuco, Av. Jornalista Anibal Fernandes, 50.740-560, Recife, Brazil.
  • Stefan Schulz
    Institute for Medical Informatics, Statistics and Documentation, Medical University of Graz, Austria.