A Method Based on Artificial Intelligence To Fully Automatize The Evaluation of Bovine Blastocyst Images.

Journal: Scientific reports
Published Date:

Abstract

Morphological analysis is the standard method of assessing embryo quality; however, its inherent subjectivity tends to generate discrepancies among evaluators. Using genetic algorithms and artificial neural networks (ANNs), we developed a new method for embryo analysis that is more robust and reliable than standard methods. Bovine blastocysts produced in vitro were classified as grade 1 (excellent or good), 2 (fair), or 3 (poor) by three experienced embryologists according to the International Embryo Technology Society (IETS) standard. The images (n = 482) were subjected to automatic feature extraction, and the results were used as input for a supervised learning process. One part of the dataset (15%) was used for a blind test posterior to the fitting, for which the system had an accuracy of 76.4%. Interestingly, when the same embryologists evaluated a sub-sample (10%) of the dataset, there was only 54.0% agreement with the standard (mode for grades). However, when using the ANN to assess this sub-sample, there was 87.5% agreement with the modal values obtained by the evaluators. The presented methodology is covered by National Institute of Industrial Property (INPI) and World Intellectual Property Organization (WIPO) patents and is currently undergoing a commercial evaluation of its feasibility.

Authors

  • José Celso Rocha
  • Felipe José Passalia
    Universidade Estadual Paulista (Unesp), Faculdade de Ciências e Letras (FCL), Câmpus de Assis, Laboratório de Matemática Aplicada, Assis, SP, Brazil.
  • Felipe Delestro Matos
    Institut de Biologie de l'École Normale Supérieure de Paris, Paris, France.
  • Maria Beatriz Takahashi
    Departamento de Ciências Biológicas, Universidade Estadual Paulista "Júlio de Mesquita Filho" Campus-Assis, Avenida Dom Antonio 2100, Assis, SP, 19806-900, Brazil.
  • Diego de Souza Ciniciato
    Universidade Estadual Paulista (Unesp), Faculdade de Ciências e Letras (FCL), Câmpus de Assis, Laboratório de Matemática Aplicada, Assis, SP, Brazil.
  • Marc Peter Maserati
    In Vitro Brasil SA - Mogi Mirim, Mogi Mirim, SP, Brazil.
  • Mayra Fernanda Alves
    In Vitro Brasil SA - Mogi Mirim, Mogi Mirim, SP, Brazil.
  • Tamie Guibu de Almeida
    In Vitro Brasil SA - Mogi Mirim, Mogi Mirim, SP, Brazil.
  • Bruna Lopes Cardoso
    In Vitro Brasil SA - Mogi Mirim, Mogi Mirim, SP, Brazil.
  • Andrea Cristina Basso
    In Vitro Brasil SA - Mogi Mirim, Mogi Mirim, SP, Brazil.
  • Marcelo Fábio Gouveia Nogueira
    Universidade Estadual Paulista (Unesp), FCL, Câmpus de Assis, Laboratório de Micromanipulação Embrionária, Assis, SP, Brazil. marcelo@assis.unesp.br.