Improving the interoperability of biomedical ontologies with compound alignments.

Journal: Journal of biomedical semantics
Published Date:

Abstract

BACKGROUND: Ontologies are commonly used to annotate and help process life sciences data. Although their original goal is to facilitate integration and interoperability among heterogeneous data sources, when these sources are annotated with distinct ontologies, bridging this gap can be challenging. In the last decade, ontology matching systems have been evolving and are now capable of producing high-quality mappings for life sciences ontologies, usually limited to the equivalence between two ontologies. However, life sciences research is becoming increasingly transdisciplinary and integrative, fostering the need to develop matching strategies that are able to handle multiple ontologies and more complex relations between their concepts.

Authors

  • Daniela Oliveira
    Insight Centre for Data Analytics, NUI Galway, Galway Business Park, Dangan, Galway, H91 AEX4, Ireland. daniela.oliveira@insight-centre.org.
  • Catia Pesquita
    Departamento de Informática, Faculdade de Ciências, Universidade de Lisboa, Portugal.