Architectures and accuracy of artificial neural network for disease classification from omics data.

Journal: BMC genomics
Published Date:

Abstract

BACKGROUND: Deep learning has made tremendous successes in numerous artificial intelligence applications and is unsurprisingly penetrating into various biomedical domains. High-throughput omics data in the form of molecular profile matrices, such as transcriptomes and metabolomes, have long existed as a valuable resource for facilitating diagnosis of patient statuses/stages. It is timely imperative to compare deep learning neural networks against classical machine learning methods in the setting of matrix-formed omics data in terms of classification accuracy and robustness.

Authors

  • Hui Yu
    Engineering Technology Research Center of Shanxi Province for Opto-Electric Information and Instrument, Taiyuan 030051, China. 13934603474@nuc.edu.cn.
  • David C Samuels
    Vanderbilt University School of Medicine,Vanderbilt University, Nashville, 37232, TN, USA.
  • Ying-Yong Zhao
    Key Laboratory of Resource Biology and Biotechnology in Western China, School of Life Sciences, Northwest University, Xi'an, 710069, Shaanxi, China.
  • Yan Guo
    State Key Laboratory of Pathogen and Biosecurity, Beijing 100071, China.