Exploiting Graphoelements and Convolutional Neural Networks with Long Short Term Memory for Classification of the Human Electroencephalogram.

Journal: Scientific reports
Published Date:

Abstract

The electroencephalogram (EEG) is a cornerstone of neurophysiological research and clinical neurology. Historically, the classification of EEG as showing normal physiological or abnormal pathological activity has been performed by expert visual review. The potential value of unbiased, automated EEG classification has long been recognized, and in recent years the application of machine learning methods has received significant attention. A variety of solutions using convolutional neural networks (CNN) for EEG classification have emerged with impressive results. However, interpretation of CNN results and their connection with underlying basic electrophysiology has been unclear. This paper proposes a CNN architecture, which enables interpretation of intracranial EEG (iEEG) transients driving classification of brain activity as normal, pathological or artifactual. The goal is accomplished using CNN with long short-term memory (LSTM). We show that the method allows the visualization of iEEG graphoelements with the highest contribution to the final classification result using a classification heatmap and thus enables review of the raw iEEG data and interpret the decision of the model by electrophysiology means.

Authors

  • P Nejedly
    Mayo Systems Electrophysiology Laboratory, Department of Neurology, Mayo Clinic, Rochester, MN, 55905, USA. Nejedly.Petr@mayo.edu.
  • V Kremen
    Mayo Systems Electrophysiology Laboratory, Department of Neurology, Mayo Clinic, Rochester, MN, 55905, USA. Kremen.Vaclav@mayo.edu.
  • V Sladky
    Mayo Systems Electrophysiology Laboratory, Department of Neurology, Mayo Clinic, Rochester, MN, 55905, USA.
  • J Cimbalnik
    Mayo Systems Electrophysiology Laboratory, Department of Neurology, Mayo Clinic, Rochester, MN, 55905, USA.
  • P Klimes
    Mayo Systems Electrophysiology Laboratory, Department of Neurology, Mayo Clinic, Rochester, MN, 55905, USA.
  • F Plesinger
    Institute of Scientific Instruments of the Czech Academy of Sciences, Brno, Czech Republic.
  • I Viscor
  • M Pail
    Department of Neurology, St. Anne's University Hospital, Brno, Czech Republic.
  • J Halamek
  • B H Brinkmann
    Mayo Systems Electrophysiology Laboratory, Department of Neurology, Mayo Clinic, Rochester, MN, 55905, USA.
  • M Brazdil
    Department of Neurology, St. Anne's University Hospital, Brno, Czech Republic.
  • P Jurak
  • G Worrell
    Mayo Systems Electrophysiology Laboratory, Department of Neurology, Mayo Clinic, Rochester, MN, 55905, USA. Worrell.Gregory@mayo.edu.