Can exascale computing and explainable artificial intelligence applied to plant biology deliver on the United Nations sustainable development goals?

Journal: Current opinion in biotechnology
PMID:

Abstract

Human population growth and accelerated climate change necessitate agricultural improvements using designer crop ideotypes (idealized plants that can grow in niche environments). Diverse and highly skilled research groups must integrate efforts to bridge the gaps needed to achieve international goals toward sustainable agriculture. Given the scale of global agricultural needs and the breadth of multiple types of omics data needed to optimize these efforts, explainable artificial intelligence (AI with a decipherable decision making process that provides a meaningful explanation to humans) and exascale computing (computers that can perform 10 floating-point operations per second, or exaflops) are crucial. Accurate phenotyping and daily-resolution climatype associations are equally important for refining ideotype production to specific environments at various levels of granularity. We review advances toward tackling technological hurdles to solve multiple United Nations Sustainable Development Goals and discuss a vision to overcome gaps between research and policy.

Authors

  • Jared Streich
    DOE Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN37831, United States.
  • Jonathon Romero
    DOE Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN37831, United States; Bredesen Center for Interdisciplinary Interdisciplinary Research and Graduate Education, University of Tennessee, Knoxville, TN 37996-3394, United States.
  • João Gabriel Felipe Machado Gazolla
    DOE Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN37831, United States.
  • David Kainer
    DOE Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN37831, United States.
  • Ashley Cliff
    DOE Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN37831, United States; Bredesen Center for Interdisciplinary Interdisciplinary Research and Graduate Education, University of Tennessee, Knoxville, TN 37996-3394, United States.
  • Erica Teixeira Prates
    DOE Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN37831, United States.
  • James B Brown
    Molecular Ecosystems Biology Department, Division of Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States.
  • Sacha Khoury
    Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom.
  • Gerald A Tuskan
    DOE Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN37831, United States.
  • Michael Garvin
    DOE Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN37831, United States.
  • Daniel Jacobson
    DOE Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN37831, United States; Bredesen Center for Interdisciplinary Interdisciplinary Research and Graduate Education, University of Tennessee, Knoxville, TN 37996-3394, United States; Department of Psychology, University of Tennessee, Knoxville, TN 37996, United States. Electronic address: jacobsonda@ornl.gov.
  • Antoine L Harfouche
    Department for Innovation in Biological, Agro-food and Forest Systems, University of Tuscia, Viterbo, VT 01100, Italy. Electronic address: aharfouche@unitus.it.