Drug delivery: Experiments, mathematical modelling and machine learning.

Journal: Computers in biology and medicine
Published Date:

Abstract

We address the problem of determining from laboratory experiments the data necessary for a proper modeling of drug delivery and efficacy in anticancer therapy. There is an inherent difficulty in extracting the necessary parameters, because the experiments often yield an insufficient quantity of information. To overcome this difficulty, we propose to combine real experiments, numerical simulation, and Machine Learning (ML) based on Artificial Neural Networks (ANN), aiming at a reliable identification of the physical model factors, e.g. the killing action of the drug. To this purpose, we exploit the employed mathematical-numerical model for tumor growth and drug delivery, together with the ANN - ML procedure, to integrate the results of the experimental tests and feed back the model itself, thus obtaining a reliable predictive tool. The procedure represents a hybrid data-driven, physics-informed approach to machine learning. The physical and mathematical model employed for the numerical simulations is without extracellular matrix (ECM) and healthy cells because of the experimental conditions we reproduce.

Authors

  • Daniela P Boso
    Department of Civil, Environmental and Architectural Engineering, University of Padova, Via Marzolo 9, I-35131, Padova, Italy. Electronic address: daniela.boso@unipd.it.
  • Daniele Di Mascolo
    Laboratory of Nanotechnology for Precision Medicine, Italian Institute of Technology, Via Morego, 30 16163, Genova, Italy.
  • Raffaella Santagiuliana
    Department of Civil, Environmental and Architectural Engineering, University of Padova, Via Marzolo 9, I-35131, Padova, Italy.
  • Paolo Decuzzi
    Laboratory of Nanotechnology for Precision Medicine, Italian Institute of Technology, Via Morego, 30 16163, Genova, Italy.
  • Bernhard A Schrefler
    Department of Civil, Environmental and Architectural Engineering, University of Padova, Via Marzolo 9, I-35131, Padova, Italy; Institute for Advanced Study, Technische Universität München, Lichtenbergstraße 2, 85748, Garching bei München, Germany.