On tower and checkerboard neural network architectures for gene expression inference.

Journal: BMC genomics
Published Date:

Abstract

BACKGROUND: One possible approach how to economically facilitate gene expression profiling is to use the L1000 platform which measures the expression of ∼1,000 landmark genes and uses a computational method to infer the expression of another ∼10,000 genes. One such method for the gene expression inference is a D-GEX which employs neural networks.

Authors

  • Vladimír Kunc
    Department of Computer Science, Karlovo náměstí 13, Prague, 121 35, Czech Republic. kuncvlad@fel.cvut.cz.
  • Jiří Kléma
    Department of Computer Science, Czech Technical University in Prague, Karlovo náměstí 13, 121 35, Prague 2, Czech Republic. klema@fel.cvut.cz.