Automated segmentation of endometrial cancer on MR images using deep learning.

Journal: Scientific reports
Published Date:

Abstract

Preoperative MR imaging in endometrial cancer patients provides valuable information on local tumor extent, which routinely guides choice of surgical procedure and adjuvant therapy. Furthermore, whole-volume tumor analyses of MR images may provide radiomic tumor signatures potentially relevant for better individualization and optimization of treatment. We apply a convolutional neural network for automatic tumor segmentation in endometrial cancer patients, enabling automated extraction of tumor texture parameters and tumor volume. The network was trained, validated and tested on a cohort of 139 endometrial cancer patients based on preoperative pelvic imaging. The algorithm was able to retrieve tumor volumes comparable to human expert level (likelihood-ratio test, [Formula: see text]). The network was also able to provide a set of segmentation masks with human agreement not different from inter-rater agreement of human experts (Wilcoxon signed rank test, [Formula: see text], [Formula: see text], and [Formula: see text]). An automatic tool for tumor segmentation in endometrial cancer patients enables automated extraction of tumor volume and whole-volume tumor texture features. This approach represents a promising method for automatic radiomic tumor profiling with potential relevance for better prognostication and individualization of therapeutic strategy in endometrial cancer.

Authors

  • Erlend Hodneland
    NORCE Norwegian Research Centre, Bergen, Norway. erlend.hodneland@uib.no.
  • Julie A Dybvik
    Department of Radiology, MMIV Mohn Medical Imaging and Visualization Centre, Haukeland University Hospital, Bergen, Norway.
  • Kari S Wagner-Larsen
    Department of Radiology, MMIV Mohn Medical Imaging and Visualization Centre, Haukeland University Hospital, Bergen, Norway.
  • Veronika Šoltészová
    NORCE Norwegian Research Centre, Bergen, Norway.
  • Antonella Z Munthe-Kaas
    Department of Radiology, MMIV Mohn Medical Imaging and Visualization Centre, Haukeland University Hospital, Bergen, Norway.
  • Kristine E Fasmer
    Department of Radiology, MMIV Mohn Medical Imaging and Visualization Centre, Haukeland University Hospital, Bergen, Norway.
  • Camilla Krakstad
    Department of Clinical Science, Centre for Cancer Biomarkers, University of Bergen, Bergen, Norway.
  • Arvid Lundervold
    Mohn Medical Imaging and Visualization Centre (MMIV), Haukeland University Hospital, Norway; Neuroinformatics and Image Analysis Laboratory, Department of Biomedicine, University of Bergen, Norway; Department of Health and Functioning, Western Norway University of Applied Sciences, Norway. Electronic address: mfyal@uib.no.
  • Alexander S Lundervold
    Department of Computer Science, Electrical Engineering and Mathematical Sciences, Western Norway University of Applied Sciences, Pb. 7030, Bergen, 5020, Norway.
  • Øyvind Salvesen
    Department of Public Health and General Practice, Norwegian University of Science and Technology, Trondheim, Norway.
  • Bradley J Erickson
    Department of Radiology, Radiology Informatics Lab, Mayo Clinic, Rochester, MN 55905, United States.
  • Ingfrid Haldorsen
    Department of Radiology, MMIV Mohn Medical Imaging and Visualization Centre, Haukeland University Hospital, Bergen, Norway.