A Deep Segmentation Network of Multi-Scale Feature Fusion Based on Attention Mechanism for IVOCT Lumen Contour.

Journal: IEEE/ACM transactions on computational biology and bioinformatics
Published Date:

Abstract

Recently, coronary heart disease has attracted more and more attention, where segmentation and analysis for vascular lumen contour are helpful for treatment. And intravascular optical coherence tomography (IVOCT) images are used to display lumen shapes in clinic. Thus, an automatic segmentation method for IVOCT lumen contour is necessary to reduce the doctors' workload while ensuring diagnostic accuracy. In this paper, we proposed a deep residual segmentation network of multi-scale feature fusion based on attention mechanism (RSM-Network, Residual Squeezed Multi-Scale Network) to segment the lumen contour in IVOCT images. Firstly, three different data augmentation methods including mirror level turnover, rotation and vertical flip are considered to expand the training set. Then in the proposed RSM-Network, U-Net is contained as the main body, considering its characteristic of accepting input images with any sizes. Meanwhile, the combination of residual network and attention mechanism is applied to improve the ability of global feature extraction and solve the vanishing gradient problem. Moreover, the pyramid feature extraction structure is introduced to enhance the learning ability for multi-scale features. Finally, in order to increase the matching degree between the actual output and expected output, the cross entropy loss function is also used. A series of metrics are presented to evaluate the performance of our proposed network and the experimental results demonstrate that the proposed RSM-Network can learn the contour details better, contributing to strong robustness and accuracy for IVOCT lumen contour segmentation.

Authors

  • Chenxi Huang
    Center for Outcomes Research and Evaluation, Yale-New Haven Hospital, New Haven, Connecticut, United States of America.
  • Yisha Lan
  • Gaowei Xu
    School of Electronics and Information Engineering, Tongji University, Shanghai 201804, China.
  • Xiaojun Zhai
  • Jipeng Wu
  • Fan Lin
    Division of Cardiology, Department of Internal Medicine, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.
  • Nianyin Zeng
  • Qingqi Hong
    Software School, Xiamen University, Xiamen 361005, China.
  • E Y K Ng
    School of Mechanical and Aerospace Engineering, Nanyang Technological University, Singapore.
  • Yonghong Peng
    Faculty of Computer Science, University of Sunderland, Sunderland, UK.
  • Fei Chen
    Department of Electrical and Electronic Engineering, Southern University of Science and Technology, Shenzhen, China.
  • Guokai Zhang
    3 School of Mechanical Engineering, Tianjin University , Tianjin, China .