Automated left and right ventricular chamber segmentation in cardiac magnetic resonance images using dense fully convolutional neural network.

Journal: Computer methods and programs in biomedicine
Published Date:

Abstract

BACKGROUND AND OBJECTIVE: Segmentation of the left ventricular (LV) myocardium (Myo) and RV endocardium on cine cardiac magnetic resonance (CMR) images represents an essential step for cardiac-function evaluation and diagnosis. In order to have a common reference for comparing segmentation algorithms, several CMR image datasets were made available, but in general they do not include the most apical and basal slices, and/or gold standard tracing is limited to only one of the two ventricles, thus not fully corresponding to real clinical practice. Our aim was to develop a deep learning (DL) approach for automated segmentation of both RV and LV chambers from short-axis (SAX) CMR images, reporting separately the performance for basal slices, together with the applied criterion of choice.

Authors

  • Marco Penso
    Department of Cardiovascular Imaging, Centro Cardiologico Monzino IRCCS, Milan, Italy. Electronic address: marco.penso@cardiologicomonzino.it.
  • Sara Moccia
    Department of Electronics, Information, and Bioengineering, Politecnico di Milano, Milan, Italy; Department of Advanced Robotics, Istituto Italiano di Tecnologia, Genoa, Italy. Electronic address: sara.moccia@iit.it.
  • Stefano Scafuri
    Division of Interventional Structural Cardiology, Cardiothoracovascular Department, Careggi University Hospital, Florence, Italy.
  • Giuseppe Muscogiuri
    Clinical Cardiology Unit and Department of Cardiovascular Imaging, Centro Cardiologico Monzino IRCCS, Milan, Italy.
  • Gianluca Pontone
    Department of Cardiovascular Imaging, Centro Cardiologico Monzino IRCCS, Milan, Italy.
  • Mauro Pepi
    Clinical Cardiology Unit and Department of Cardiovascular Imaging, Centro Cardiologico Monzino IRCCS, Milan, Italy.
  • Enrico Gianluca Caiani
    Department of Electronics, Information and Bioengineering, Politecnico di Milano, Milan, Italy. enrico.caiani@polimi.it.