Prediction of drug adverse events using deep learning in pharmaceutical discovery.

Journal: Briefings in bioinformatics
Published Date:

Abstract

Traditional machine learning methods used to detect the side effects of drugs pose significant challenges as feature engineering processes are labor-intensive, expert-dependent, time-consuming and cost-ineffective. Moreover, these methods only focus on detecting the association between drugs and their side effects or classifying drug-drug interaction. Motivated by technological advancements and the availability of big data, we provide a review on the detection and classification of side effects using deep learning approaches. It is shown that the effective integration of heterogeneous, multidimensional drug data sources, together with the innovative deployment of deep learning approaches, helps reduce or prevent the occurrence of adverse drug reactions (ADRs). Deep learning approaches can also be exploited to find replacements for drugs which have side effects or help to diversify the utilization of drugs through drug repurposing.

Authors

  • Chun Yen Lee
    College of Science, Health and Engineering, La Trobe University, Melbourne, Australia.
  • Yi-Ping Phoebe Chen
    Department of Computer Science and Information Technology, School of Engineering and Mathematical Sciences La Trobe University Bundoora Victoria Australia.