Accelerating the pace of ecotoxicological assessment using artificial intelligence.

Journal: Ambio
Published Date:

Abstract

Species Sensitivity Distribution (SSD) is a key metric for understanding the potential ecotoxicological impacts of chemicals. However, SSDs have been developed to estimate for only handful of chemicals due to the scarcity of experimental toxicity data. Here we present a novel approach to expand the chemical coverage of SSDs using Artificial Neural Network (ANN). We collected over 2000 experimental toxicity data in Lethal Concentration 50 (LC50) for 8 aquatic species and trained an ANN model for each of the 8 aquatic species based on molecular structure. The R values of resulting ANN models range from 0.54 to 0.75 (median R = 0.69). We applied the predicted LC50 values to fit SSD curves using bootstrapping method, generating SSDs for 8424 chemicals in the ToX21 database. The dataset is expected to serve as a screening-level reference SSD database for understanding potential ecotoxicological impacts of chemicals.

Authors

  • Runsheng Song
    Bren School of Environmental Science and Management, University of California , Santa Barbara, California 93106, United States.
  • Dingsheng Li
    University of Nevada, Reno, 1664 N Virginia St, Reno, NV, 89557, USA.
  • Alexander Chang
    Emory Rollins School of Public Health, 1518 Clifton Rd, Atlanta, GA, 30322, USA.
  • Mengya Tao
    Bren School of Environmental Science and Management, University of California, Santa Barbara, Santa Barbara, CA, 98121, USA.
  • Yuwei Qin
    Bren School of Environmental Science and Management, University of California, Santa Barbara, Santa Barbara, CA, 98121, USA.
  • Arturo A Keller
    Bren School of Environmental Science and Management, University of California , Santa Barbara, California 93106, United States.
  • Sangwon Suh
    Bren School of Environmental Science and Management, University of California , Santa Barbara, California 93106, United States.