Colon Cancer Grading Using Infrared Spectroscopic Imaging-Based Deep Learning.

Journal: Applied spectroscopy
Published Date:

Abstract

Tumor grade assessment is critical to the treatment of cancers. A pathologist typically evaluates grade by examining morphologic organization in tissue using hematoxylin and eosin (H&E) stained tissue sections. Fourier transform infrared spectroscopic (FT-IR) imaging provides an alternate view of tissue in which spatially specific molecular information from unstained tissue can be utilized. Here, we examine the potential of IR imaging for grading colon cancer in biopsy samples. We used a 148-patient cohort to develop a deep learning classifier to estimate the tumor grade using IR absorption. We demonstrate that FT-IR imaging can be a viable tool to determine colorectal cancer grades, which we validated on an independent cohort of surgical resections. This work demonstrates that harnessing molecular information from FT-IR imaging and coupling it with morphometry is a potential path to develop clinically relevant grade prediction models.

Authors

  • Saumya Tiwari
  • Kianoush Falahkheirkhah
    Department of Chemical and Biomolecular Engineering and Chemistry and Beckman Institute for Advanced Science and Technology, 124331University of Illinois at Urbana-Champaign, Urbana, IL, USA.
  • Georgina Cheng
    8100Carle Foundation Hospital (Carle Health), Urbana, IL, USA.
  • Rohit Bhargava
    Department of Bioengineering, University of Illinois, Urbana-Champaign, Urbana, IL, USA.