Assessing radiomics feature stability with simulated CT acquisitions.

Journal: Scientific reports
Published Date:

Abstract

Medical imaging quantitative features had once disputable usefulness in clinical studies. Nowadays, advancements in analysis techniques, for instance through machine learning, have enabled quantitative features to be progressively useful in diagnosis and research. Tissue characterisation is improved via the "radiomics" features, whose extraction can be automated. Despite the advances, stability of quantitative features remains an important open problem. As features can be highly sensitive to variations of acquisition details, it is not trivial to quantify stability and efficiently select stable features. In this work, we develop and validate a Computed Tomography (CT) simulator environment based on the publicly available ASTRA toolbox ( www.astra-toolbox.com ). We show that the variability, stability and discriminative power of the radiomics features extracted from the virtual phantom images generated by the simulator are similar to those observed in a tandem phantom study. Additionally, we show that the variability is matched between a multi-center phantom study and simulated results. Consequently, we demonstrate that the simulator can be utilised to assess radiomics features' stability and discriminative power.

Authors

  • Kyriakos Flouris
    Computer Vision Lab, ETH Zurich, Zurich, Switzerland. kflouris@vision.ee.ethz.ch.
  • Oscar Jimenez-Del-Toro
    University of Applied Sciences Western Switzerland (HES-SO) Valais, Sierre, Switzerland.
  • Christoph Aberle
    Clinic of Radiology and Nuclear Medicine, University Hospital Basel, University of Basel, Basel, Switzerland.
  • Michael Bach
    Clinic of Radiology and Nuclear Medicine, University Hospital Basel, Petersgraben 4, 4031, Basel, Switzerland.
  • Roger Schaer
    University of Applied Sciences Western Switzerland (HES-SO), Sierre, Switzerland. Electronic address: roger.schaer@hevs.ch.
  • Markus M Obmann
    Clinic of Radiology and Nuclear Medicine, University Hospital Basel, University of Basel, Basel, Switzerland.
  • Bram Stieltjes
    University of Basel, University Hospital Basel, Radiology and Nuclear Medicine Clinic, Basel, Switzerland.
  • Henning Muller
  • Adrien Depeursinge
    HES-SO Valais, TechnopĂ´le 3, Sierre 3960, Switzerland.
  • Ender Konukoglu