Deep Learning Achieves Neuroradiologist-Level Performance in Detecting Hydrocephalus Requiring Treatment.

Journal: Journal of digital imaging
Published Date:

Abstract

In large clinical centers a small subset of patients present with hydrocephalus that requires surgical treatment. We aimed to develop a screening tool to detect such cases from the head MRI with performance comparable to neuroradiologists. We leveraged 496 clinical MRI exams collected retrospectively at a single clinical site from patients referred for any reason. This diagnostic dataset was enriched to have 259 hydrocephalus cases. A 3D convolutional neural network was trained on 16 manually segmented exams (ten hydrocephalus) and subsequently used to automatically segment the remaining 480 exams and extract volumetric anatomical features. A linear classifier of these features was trained on 240 exams to detect cases of hydrocephalus that required treatment with surgical intervention. Performance was compared to four neuroradiologists on the remaining 240 exams. Performance was also evaluated on a separate screening dataset of 451 exams collected from a routine clinical population to predict the consensus reading from four neuroradiologists using images alone. The pipeline was also tested on an external dataset of 31 exams from a 2nd clinical site. The most discriminant features were the Magnetic Resonance Hydrocephalic Index (MRHI), ventricle volume, and the ratio between ventricle and brain volume. At matching sensitivity, the specificity of the machine and the neuroradiologists did not show significant differences for detection of hydrocephalus on either dataset (proportions test, p > 0.05). ROC performance compared favorably with the state-of-the-art (AUC 0.90-0.96), and replicated in the external validation. Hydrocephalus cases requiring treatment can be detected automatically from MRI in a heterogeneous patient population based on quantitative characterization of brain anatomy with performance comparable to that of neuroradiologists.

Authors

  • Yu Huang
    School of Data Science and Software Engineering, Qingdao University, Qingdao 266021, China.
  • Raquel Moreno
    Department of Radiology, Memorial Sloan Kettering Cancer Center, New York, NY, 10065, USA.
  • Rachna Malani
    Department of Neurology, Memorial Sloan Kettering Cancer Center, New York, NY, 10065, USA.
  • Alicia Meng
    Department of Radiology, Memorial Sloan Kettering Cancer Center, New York, NY, 10065, USA.
  • Nathaniel Swinburne
    Department of Radiology, Icahn School of Medicine, New York, NY, USA.
  • Andrei I Holodny
    From the Departments of Radiology (N.C.S., V.Y., Y.R.C., D.C.G., J.T., V.H., S.S.H., S.K., J.L., K.J., A.I.H., R.J.Y.), Radiation Oncology (J.T.Y.), Neurosurgery (N.M.), Neurology (J.S.), and Epidemiology and Biostatistics, Division of Computational Oncology, (K.P., J.G., S.P.S.), Memorial Sloan Kettering Cancer Center, 1275 York Ave, New York, NY 10065; Weill Cornell Medical College, New York, NY (J.K.).
  • Ye Choi
    Department of Radiology, Memorial Sloan Kettering Cancer Center, New York, NY, 10065, USA.
  • Henry Rusinek
    Department of Radiology, Grossman School of Medicine, New York University, New York, NY, 10016, USA.
  • James B Golomb
    Department of Psychiatry, Grossman School of Medicine, New York University, New York, NY, 10016, USA.
  • Ajax George
    Department of Radiology, Grossman School of Medicine, New York University, New York, NY, 10016, USA.
  • Lucas C Parra
    Department of Biomedical Engineering, City College of New York, 160 Convent Ave, Steinman Hall Room 401, New York, NY, 10031, USA. parra@ccny.cuny.edu.
  • Robert J Young
    Neuroradiology Service, Department of Radiology, Memorial Sloan Kettering Cancer Center, New York, New York, USA.