Deep neural network trained on gigapixel images improves lymph node metastasis detection in clinical settings.

Journal: Nature communications
Published Date:

Abstract

The pathological identification of lymph node (LN) metastasis is demanding and tedious. Although convolutional neural networks (CNNs) possess considerable potential in improving the process, the ultrahigh-resolution of whole slide images hinders the development of a clinically applicable solution. We design an artificial-intelligence-assisted LN assessment workflow to facilitate the routine counting of metastatic LNs. Unlike previous patch-based approaches, our proposed method trains CNNs by using 5-gigapixel images, obviating the need for lesion-level annotations. Trained on 5907 LN images, our algorithm identifies metastatic LNs in gastric cancer with a slide-level area under the receiver operating characteristic curve (AUC) of 0.9936. Clinical experiments reveal that the workflow significantly improves the sensitivity of micrometastasis identification (81.94% to 95.83%, P < .001) and isolated tumor cells (67.95% to 96.15%, P < .001) in a significantly shorter review time (-31.5%, P < .001). Cross-site evaluation indicates that the algorithm is highly robust (AUC = 0.9829).

Authors

  • Shih-Chiang Huang
    Department of Anatomic Pathology, Linkou Chang Gung Memorial Hospital, Chang Gung University, College of Medicine, Taoyuan, Taiwan.
  • Chi-Chung Chen
    Department of Electrical Engineering, National Chiayi University, 300 Syuefu Road, Chiayi City 60004, Taiwan.
  • Jui Lan
    Department of Anatomic Pathology, Kaohsiung Chang Gung Memorial Hospital, Chang Gung University, College of Medicine, Kaohsiung, Taiwan.
  • Tsan-Yu Hsieh
    Department of Anatomic Pathology, Keelung Chang Gung Memorial Hospital, Chang Gung University, College of Medicine, Keelung, Taiwan.
  • Huei-Chieh Chuang
    Department of Anatomic Pathology, Chiayi Chang Gung Memorial Hospital, Chang Gung University, College of Medicine, Chiayi, Taiwan.
  • Meng-Yao Chien
    aetherAI Co., Ltd., Taipei, Taiwan.
  • Tao-Sheng Ou
    aetherAI Co., Ltd., Taipei, Taiwan.
  • Kuang-Hua Chen
    Department of Anatomic Pathology, Linkou Chang Gung Memorial Hospital, Chang Gung University, College of Medicine, Taoyuan, Taiwan.
  • Ren-Chin Wu
    Department of Anatomic Pathology, Linkou Chang Gung Memorial Hospital, Chang Gung University, College of Medicine, Taoyuan, Taiwan.
  • Yu-Jen Liu
    Department of Anatomic Pathology, Linkou Chang Gung Memorial Hospital, Chang Gung University, College of Medicine, Taoyuan, Taiwan.
  • Chi-Tung Cheng
    Department of Trauma and Emergency Surgery, Chang Gung Memorial Hospital, Linkou, Chang Gung University, Taoyuan, Taiwan.
  • Yu-Jen Huang
    Department of Computer Science and Information Engineering, National Taiwan University, Taipei, Taiwan.
  • Liang-Wei Tao
    Department of Computer Science and Information Engineering, National Taiwan University, Taipei, Taiwan.
  • An-Fong Hwu
    Department of Computer Science and Information Engineering, National Taiwan University, Taipei, Taiwan.
  • I-Chieh Lin
    Department of Anatomic Pathology, Linkou Chang Gung Memorial Hospital, Chang Gung University, College of Medicine, Taoyuan, Taiwan.
  • Shih-Hao Hung
    Department of Computer Science and Information Engineering, National Taiwan University, Taipei, Taiwan.
  • Chao-Yuan Yeh
  • Tse-Ching Chen
    Department of Anatomic Pathology, Linkou Chang Gung Memorial Hospital, Chang Gung University, College of Medicine, Taoyuan, Taiwan. ctc323@cgmh.org.tw.