Shared subspace-based radial basis function neural network for identifying ncRNAs subcellular localization.

Journal: Neural networks : the official journal of the International Neural Network Society
Published Date:

Abstract

Non-coding RNAs (ncRNAs) play an important role in revealing the mechanism of human disease for anti-tumor and anti-virus substances. Detecting subcellular locations of ncRNAs is a necessary way to study ncRNA. Traditional biochemical methods are time-consuming and labor-intensive, and computational-based methods can help detect the location of ncRNAs on a large scale. However, many models did not consider the correlation information among multiple subcellular localizations of ncRNAs. This study proposes a radial basis function neural network based on shared subspace learning (RBFNN-SSL), which extract shared structures in multi-labels. To evaluate performance, our classifier is tested on three ncRNA datasets. Our model achieves better performance in experimental results.

Authors

  • Yijie Ding
    School of Computer Science and Technology, Tianjin University, Tianjin 300350, China. wuxi_dyj@tju.edu.cn.
  • Prayag Tiwari
    Department of Information Engineering, University of Padova, Italy. Electronic address: prayag.tiwari@dei.unipd.it.
  • Fei Guo
    School of Electronic Information Engineering, Tianjin University, Tianjin 300072, China. Electronic address: gfjy001@yahoo.com.
  • Quan Zou