AIMC Topic: RNA, Untranslated

Clear Filters Showing 1 to 10 of 59 articles

Cervical cancer diagnostics: non-coding RNAs and biosensors to AI-derived methods.

Clinica chimica acta; international journal of clinical chemistry
Cervical cancer ranks fourth in terms of cancer mortality among women. The most important risk factor for cervical cancer is infection with HPV 16 and HPV 18. The prevalence and mortality rates of this cancer are much higher in countries with low and...

RiNALMo: general-purpose RNA language models can generalize well on structure prediction tasks.

Nature communications
While RNA has recently been recognized as an interesting small-molecule drug target, many challenges remain to be addressed before we take full advantage of it. This emphasizes the necessity to improve our understanding of its structures and function...

NPI-HetGNN: A Prediction Model of ncRNA-Protein Interactions Based on Heterogeneous Graph Neural Networks.

Interdisciplinary sciences, computational life sciences
Non-coding RNAs (ncRNAs) are one of the components of epigenetic mechanisms that regulates gene expression. Studying ncRNA-protein interactions (NPI) can help to explore a wide range of biological features and related diseases. Traditional NPI resear...

Construction of exosome non-coding RNA feature for non-invasive, early detection of gastric cancer patients by machine learning: a multi-cohort study.

Gut
BACKGROUND AND OBJECTIVE: Gastric cancer (GC) remains a prevalent and preventable disease, yet accurate early diagnostic methods are lacking. Exosome non-coding RNAs (ncRNAs), a type of liquid biopsy, have emerged as promising diagnostic biomarkers f...

Deep learning-based computational approach for predicting ncRNAs-disease associations in metaplastic breast cancer diagnosis.

BMC cancer
Non-coding RNAs (ncRNAs) play a crucial role in breast cancer progression, necessitating advanced computational approaches for precise disease classification. This study introduces a Deep Reinforcement Learning (DRL)-based framework for predicting nc...

NPI-HGNN: A Heterogeneous Graph Neural Network-Based Approach for Predicting ncRNA-Protein Interactions.

Interdisciplinary sciences, computational life sciences
Accurate identification of ncRNA-protein interactions (NPIs) is critical for understanding various cellular activities and biological functions of ncRNAs and proteins. Many sequence- and/or structure- and graph-based computational approaches have bee...

Representation of non-coding RNA-mediated regulation of gene expression using the Gene Ontology.

RNA biology
Regulatory non-coding RNAs (ncRNAs) are increasingly recognized as integral to the control of biological processes. This is often through the targeted regulation of mRNA expression, but this is by no means the only mechanism through which regulatory ...

Discovery of Novel Biomarkers with Extended Non-Coding RNA Interactor Networks from Genetic and Protein Biomarkers.

International journal of molecular sciences
Curated online interaction databases and gene ontology tools have streamlined the analysis of highly complex gene/protein networks. However, understanding of disease pathogenesis has gradually shifted from a protein-based core to complex interactive ...

Comparison and benchmark of deep learning methods for non-coding RNA classification.

PLoS computational biology
The involvement of non-coding RNAs in biological processes and diseases has made the exploration of their functions crucial. Most non-coding RNAs have yet to be studied, creating the need for methods that can rapidly classify large sets of non-coding...

Machine learning for catalysing the integration of noncoding RNA in research and clinical practice.

EBioMedicine
The human transcriptome predominantly consists of noncoding RNAs (ncRNAs), transcripts that do not encode proteins. The noncoding transcriptome governs a multitude of pathophysiological processes, offering a rich source of next-generation biomarkers....