Explainable machine learning methods and respiratory oscillometry for the diagnosis of respiratory abnormalities in sarcoidosis.

Journal: BMC medical informatics and decision making
PMID:

Abstract

BACKGROUND: In this work, we developed many machine learning classifiers to assist in diagnosing respiratory changes associated with sarcoidosis, based on results from the Forced Oscillation Technique (FOT), a non-invasive method used to assess pulmonary mechanics. In addition to accurate results, there is a particular interest in their interpretability and explainability, so we used Genetic Programming since the classification is made with intelligible expressions and we also evaluate the feature importance in different experiments to find the more discriminative features.

Authors

  • Allan Danilo de Lima
    Electronic Engineering Post-Graduation Program, State University of Rio de Janeiro, Rio de Janeiro, Brazil.
  • Agnaldo J Lopes
    Pulmonary Function Laboratory, Pedro Ernesto University Hospital, Brazil.
  • Jorge Luis Machado do Amaral
    Department of Electronics and Telecommunications Engineering, Rio de Janeiro State University, Rio de Janeiro, Brazil.
  • Pedro Lopes de Melo
    Biomedical Instrumentation Laboratory, Institute of Biology Roberto Alcantara Gomes and Laboratory of Clinical and Experimental Research in Vascular Biology (BioVasc), Rio de Janeiro State University, Rio de Janeiro, Brazil. plopes@uerj.br.