Identification of Asymptomatic COVID-19 Patients on Chest CT Images Using Transformer-Based or Convolutional Neural Network-Based Deep Learning Models.

Journal: Journal of digital imaging
Published Date:

Abstract

Novel coronavirus disease 2019 (COVID-19) has rapidly spread throughout the world; however, it is difficult for clinicians to make early diagnoses. This study is to evaluate the feasibility of using deep learning (DL) models to identify asymptomatic COVID-19 patients based on chest CT images. In this retrospective study, six DL models (Xception, NASNet, ResNet, EfficientNet, ViT, and Swin), based on convolutional neural networks (CNNs) or transformer architectures, were trained to identify asymptomatic patients with COVID-19 on chest CT images. Data from Yangzhou were randomly split into a training set (n = 2140) and an internal-validation set (n = 360). Data from Suzhou was the external-test set (n = 200). Model performance was assessed by the metrics accuracy, recall, and specificity and was compared with the assessments of two radiologists. A total of 2700 chest CT images were collected in this study. In the validation dataset, the Swin model achieved the highest accuracy of 0.994, followed by the EfficientNet model (0.954). The recall and the precision of the Swin model were 0.989 and 1.000, respectively. In the test dataset, the Swin model was still the best and achieved the highest accuracy (0.980). All the DL models performed remarkably better than the two experts. Last, the time on the test set diagnosis spent by two experts-42 min, 17 s (junior); and 29 min, 43 s (senior)-was significantly higher than those of the DL models (all below 2 min). This study evaluated the feasibility of multiple DL models in distinguishing asymptomatic patients with COVID-19 from healthy subjects on chest CT images. It found that a transformer-based model, the Swin model, performed best.

Authors

  • Minyue Yin
    Department of Gastroenterology, the First Affiliated Hospital of Soochow University, Suzhou, 215006, Jiangsu, China.
  • Xiaolong Liang
    Department of Orthopedics, the First Affiliated Hospital of Soochow University, Suzhou, 215006, Jiangsu, China.
  • Zilan Wang
    Department of Neurosurgery & Brain and Nerve Research Laboratory, The First Affiliated Hospital of Soochow University, Suzhou, Jiangsu Province 215006, China.
  • Yijia Zhou
    Medical School, Soochow University, Suzhou, 215006, Jiangsu, China.
  • Yu He
    Key Laboratory for Analytical Science of Food Safety and Biology, Fujian Provincial Key Laboratory of Analysis and Detection Technology for Food Safety, College of Chemistry, Fuzhou University, Fuzhou, Fujian, 350116, China.
  • Yuhan Xue
    Shanghai Key Laboratory of New Drug Design, School of Pharmacy, East China University of Science and Technology , Shanghai 200237, China.
  • Jingwen Gao
    Department of Gastroenterology, the First Affiliated Hospital of Soochow University, Suzhou, 215006, Jiangsu, China.
  • Jiaxi Lin
    Department of Gastroenterology, the First Affiliated Hospital of Soochow University, Suzhou, 215006, Jiangsu, China.
  • Chenyan Yu
    Department of Gastroenterology, the First Affiliated Hospital of Soochow University, Suzhou, 215006, Jiangsu, China.
  • Lu Liu
    College of Pharmacy, Harbin Medical University, Harbin, China.
  • Xiaolin Liu
    Department of Physics, Shanghai University of Electric Power, Shanghai 200090, China. Electronic address: xlliu@shiep.edu.cn.
  • Chao Xu
    Department of Neurology, the Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310009, China;Department of Emergency, Zhejiang Hospital, Hangzhou 310013, China.
  • Jinzhou Zhu
    Department of Gastroenterology, The First Affiliated Hospital of Soochow University, Suzhou 215000, China.