Sequence based local-global information fusion framework for vertebrae detection under pathological and FOV variation challenges.

Journal: Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society
Published Date:

Abstract

Automated vertebrae detection (identification and localization) aims to identify vertebrae and locate their centroids in medical images, which is a critical step of spinal computer-aided systems. However, due to unpredictable field-of-view and various pathology cases, the image content is diverse and the vertebral morphology can be abnormal in a variety of ways, which challenges the designed systems. In this paper, we propose an effective sequence-based framework robust to various tough cases for accurate vertebrae identification and localization. Our method consists of three sub-modules: (1) Local Feature Extraction (LFE) module designs a shape-compatible category-balanced sampler to collect patches to train a convolution neural network, which extracts representative local features and generates score maps. (2) Discriminative Sequential Image Description (DSID) module proposes a node screening strategy for reliable vertebral feature sequence construction based on feature maps and score maps. This effectively prevents false positives and false negatives in light-weighted dense prediction schemes and fuses local features into a hierarchical discriminative description of given images. (3) Spinal Pattern Exploitation (SPE) module designs an end-balanced relative position learning scheme to fuse hierarchical local-global information for comprehensively exploiting spinal patterns to overcome the FOV and pathological variation challenges in vertebrae detection. Extensive experiments on a challenging dataset consisting of 450 spinal MRIs show that the identification rate of FSDF reaches 0.974 ±0.025 and the localization error is only 4.742 ±2.928 pixels, which demonstrates the effectiveness of our method with pathological and field-of-view variations and its superiority over other state-of-the-art methods.

Authors

  • Shen Zhao
    Department of Electrical and Computer Engineering, The Ohio State University.
  • Xiangsheng Li
    School of Intelligent Engineering, Sun Yat-sen University, Shenzhen 518107, China; Department of Automation, University of Science and Technology of China, Hefei 230027, China.
  • Jiayi He
    School of Intelligent Engineering, Sun Yat-sen University, Shenzhen 518107, China.
  • Bin Chen
    Department of Otorhinolaryngology, Shanghai Sixth People's Hospital, Shanghai Jiao Tong University, Shanghai 200233, China.
  • Shuo Li
    Shanghai Mental Health Center, Shanghai Jiao Tong University School of Medicine, Shanghai, China.