Dual-Stream Spatiotemporal Networks with Feature Sharing for Monitoring Animals in the Home Cage.

Journal: Sensors (Basel, Switzerland)
Published Date:

Abstract

This paper presents a spatiotemporal deep learning approach for mouse behavioral classification in the home-cage. Using a series of dual-stream architectures with assorted modifications for optimal performance, we introduce a novel approach that jointly processes the streams at regular intervals throughout the network. The dataset in focus is an annotated, publicly available dataset of a singly-housed mouse. We achieved even better classification accuracy by ensembling the best performing models; an Inception-based network and an attention-based network, both of which utilize this attribute. Furthermore, we demonstrate through ablation studies that for all models, the architectures consistently outperform the conventional dual-stream having standalone streams. In particular, the inception-based architectures showed higher gains with their increase in accuracy anywhere between 6.59% and 15.19%. The best-performing models were also further evaluated on other mouse behavioral datasets.

Authors

  • Ezechukwu Israel Nwokedi
    School of Computer Science, College of Science, University of Lincoln, Brayford Pool, Lincoln LN6 7TS, UK.
  • Rasneer Sonia Bains
    Mary Lyon Centre at MRC Harwell, Oxfordshire OX11 0RD, UK.
  • Luc Bidaut
    College of Science, University of Lincoln, Lincoln, UK.
  • Xujiong Ye
    School of Computer Science, University of Lincoln, Lincoln LN6 7TS, UK. Electronic address: xye@lincoln.ac.uk.
  • Sara Wells
    Mary Lyon Centre at MRC Harwell, Oxfordshire OX11 0RD, UK.
  • James M Brown
    Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, MGH/Harvard Medical School, Charlestown, MA, United States.