Deep learning for advancing peptide drug development: Tools and methods in structure prediction and design.

Journal: European journal of medicinal chemistry
PMID:

Abstract

Peptides can bind challenging disease targets with high affinity and specificity, offering enormous opportunities for addressing unmet medical needs. However, peptides' unique features, including smaller size, increased structural flexibility, and limited data availability, pose additional challenges to the design process compared to proteins. This review explores the dynamic field of peptide therapeutics, leveraging deep learning to enhance structure prediction and design. Our exploration encompasses various facets of peptide research, ranging from dataset curation handling to model development. As deep learning technologies become more refined, we channel our efforts into peptide structure prediction and design, aligning with the fundamental principles of structure-activity relationships in drug development. To guide researchers in harnessing the potential of deep learning to advance peptide drug development, our insights comprehensively explore current challenges and future directions of peptide therapeutics.

Authors

  • Xinyi Wu
    Department of Immunology, School of Basic Medical Sciences, Anhui Medical University, Hefei, 230032, PR China.
  • Huitian Lin
    College of Pharmaceutical Sciences, Zhejiang University of Technology, Hangzhou, 310014, PR China.
  • Renren Bai
    Artificial Intelligent Aided Drug Discovery Lab, College of Pharmaceutical Science, Zhejiang University of Technology, Hangzhou 310014, China.
  • Hongliang Duan
    Artificial Intelligent Aided Drug Discovery Lab, College of Pharmaceutical Science, Zhejiang University of Technology, Hangzhou 310014, China.