Physics-assisted machine learning for THz time-domain spectroscopy: sensing leaf wetness.

Journal: Scientific reports
PMID:

Abstract

Signal processing techniques are of vital importance to bring THz spectroscopy to a maturity level to reach practical applications. In this work, we illustrate the use of machine learning techniques for THz time-domain spectroscopy assisted by domain knowledge based on light-matter interactions. We aim at the potential agriculture application to determine the amount of free water on plant leaves, so-called leaf wetness. This quantity is important for understanding and predicting plant diseases that need leaf wetness for disease development. The overall transmission of 12,000 distinct water droplet patterns on a plastized leaf was experimentally acquired using THz time-domain spectroscopy. We report on key insights of applying decision trees and convolutional neural networks to the data using physics-motivated choices. Eventually, we discuss the generalizability of these models to determine leaf wetness after testing them on cases with increasing deviations from the training set.

Authors

  • Milan Koumans
    Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB, Eindhoven, The Netherlands.
  • Daan Meulendijks
    Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB, Eindhoven, The Netherlands.
  • Haiko Middeljans
    Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB, Eindhoven, The Netherlands.
  • Djero Peeters
    Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB, Eindhoven, The Netherlands.
  • Jacob C Douma
    Centre for Crop System Analysis, Wageningen University, 6700 AK, Wageningen, The Netherlands.
  • Dook van Mechelen
    Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB, Eindhoven, The Netherlands. j.l.m.v.mechelen@tue.nl.