Robust compression and detection of epileptiform patterns in ECoG using a real-time spiking neural network hardware framework.

Journal: Nature communications
PMID:

Abstract

Interictal Epileptiform Discharges (IED) and High Frequency Oscillations (HFO) in intraoperative electrocorticography (ECoG) may guide the surgeon by delineating the epileptogenic zone. We designed a modular spiking neural network (SNN) in a mixed-signal neuromorphic device to process the ECoG in real-time. We exploit the variability of the inhomogeneous silicon neurons to achieve efficient sparse and decorrelated temporal signal encoding. We interface the full-custom SNN device to the BCI2000 real-time framework and configure the setup to detect HFO and IED co-occurring with HFO (IED-HFO). We validate the setup on pre-recorded data and obtain HFO rates that are concordant with a previously validated offline algorithm (Spearman's ρ = 0.75, p = 1e-4), achieving the same postsurgical seizure freedom predictions for all patients. In a remote on-line analysis, intraoperative ECoG recorded in Utrecht was compressed and transferred to Zurich for SNN processing and successful IED-HFO detection in real-time. These results further demonstrate how automated remote real-time detection may enable the use of HFO in clinical practice.

Authors

  • Filippo Costa
    Klinik für Neurochirurgie, Universitätsspital Zürich und Universität Zürich, Zürich, Switzerland. filippo.costa@usz.ch.
  • Eline V Schaft
    Department of Neurology and Neurosurgery, University Medical Center Utrecht Brain Center, University Medical Center Utrecht, Utrecht, The Netherlands.
  • Geertjan Huiskamp
    Department of Neurology and Neurosurgery, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, The Netherlands.
  • Erik J Aarnoutse
    Brain Center, Department of Neurology and Neurosurgery, University Medical Center Utrecht, Utrecht 3584 CX, The Netherlands.
  • Maryse A Van't Klooster
    Department of Neurology and Neurosurgery, University Medical Center Utrecht Brain Center, University Medical Center Utrecht, Utrecht, The Netherlands.
  • Niklaus Krayenbühl
    Department of Neurosurgery, University Hospital Zurich, Zurich, Switzerland.
  • Georgia Ramantani
    Neuropädiatrie, Universitäts-Kinderspital und Universität Zürich, Zurich, Switzerland.
  • Maeike Zijlmans
    Department of Neurology and Neurosurgery, UMC Utrecht Brain Center, University Medical Center Utrecht and Utrecht University, Utrecht, The Netherlands.
  • Giacomo Indiveri
  • Johannes Sarnthein
    Clinical Neuroscience Center, University Hospital Zurich and University of Zurich, Zurich, Switzerland.