MSH-DTI: multi-graph convolution with self-supervised embedding and heterogeneous aggregation for drug-target interaction prediction.

Journal: BMC bioinformatics
PMID:

Abstract

BACKGROUND: The rise of network pharmacology has led to the widespread use of network-based computational methods in predicting drug target interaction (DTI). However, existing DTI prediction models typically rely on a limited amount of data to extract drug and target features, potentially affecting the comprehensiveness and robustness of features. In addition, although multiple networks are used for DTI prediction, the integration of heterogeneous information often involves simplistic aggregation and attention mechanisms, which may impose certain limitations.

Authors

  • Beiyi Zhang
    College of Computer Science and Technology, Qingdao University, Qingdao, China.
  • Dongjiang Niu
    College of Computer Science and Technology, Qingdao University, Qingdao, China.
  • Lianwei Zhang
    College of Computer Science and Technology, Qingdao University, Ningxia Road, Qingdao, 266071, Shandong, China.
  • Qiang Zhang
    Yunan Provincial Center for Disease Control and Prevention, Kunming 650022, China.
  • Zhen Li
    PepsiCo R&D, Valhalla, NY, United States.