Prediction of non-muscle invasive bladder cancer recurrence using deep learning of pathology image.

Journal: Scientific reports
PMID:

Abstract

We aimed to build a deep learning-based pathomics model to predict the early recurrence of non-muscle-infiltrating bladder cancer (NMIBC) in this work. A total of 147 patients from Xuzhou Central Hospital were enrolled as the training cohort, and 63 patients from Suqian Affiliated Hospital of Xuzhou Medical University were enrolled as the test cohort. Based on two consecutive phases of patch level prediction and WSI-level predictione, we built a pathomics model, with the initial model developed in the training cohort and subjected to transfer learning, and then the test cohort was validated for generalization. The features extracted from the visualization model were used for model interpretation. After migration learning, the area under the receiver operating characteristic curve for the deep learning-based pathomics model in the test cohort was 0.860 (95% CI 0.752-0.969), with good agreement between the migration training cohort and the test cohort in predicting recurrence, and the predicted values matched well with the observed values, with p values of 0.667766 and 0.140233 for the Hosmer-Lemeshow test, respectively. The good clinical application was observed using a decision curve analysis method. We developed a deep learning-based pathomics model showed promising performance in predicting recurrence within one year in NMIBC patients. Including 10 state prediction NMIBC recurrence group pathology features be visualized, which may be used to facilitate personalized management of NMIBC patients to avoid ineffective or unnecessary treatment for the benefit of patients.

Authors

  • Guang-Yue Wang
    Department of Urology, Xuzhou Cancer Hospital, Affiliated Hospital of Jiangsu University, Xuzhou, China.
  • Jing-Fei Zhu
    School of Mathematics and Statistics and Jiangsu Key Laboratory of Education Big Data Science and Engineering, Jiangsu Normal University, No.101, Shanghai Road, Tangshan New District, Xuzhou, Jiangsu, China.
  • Qi-Chao Wang
    Department of Urology, Xuzhou Cancer Hospital, Affiliated Hospital of Jiangsu University, Xuzhou, China.
  • Jia-Xin Qin
    Department of Urology, Xuzhou Central Hospital, Jiefang South Road, No. 199, Xuzhou, Jiangsu, China.
  • Xin-Lei Wang
    HistoIndex Pte Ltd, Singapore.
  • Xing Liu
    School of Food Science and Engineering, Hainan University 58 Renmin Avenue Haikou 570228 China zhangzeling@hainanu.edu.cn benchao312@hainanu.edu.cn xuhuan.hnu@foxmail.com qichen@hainanu.edu.cn sunzhichang11@163.com hmcao@hainanu.edu.cn.
  • Xin-Yu Liu
    Department of Gastroenterology, Peking Union Medical College Hospital, Peking Union Medical College & Chinese Academy of Medical Science, Beijing 100730, China.
  • Jun-Zhi Chen
    Department of Urology, Xuzhou Central Hospital, Jiefang South Road, No. 199, Xuzhou, Jiangsu, China.
  • Jie-Fei Zhu
    Department of Pathology, Xuzhou Central Hospital, Xuzhou, China.
  • Shi-Chao Zhuo
    Department of Pathology, Xuzhou Central Hospital, Xuzhou, China.
  • Di Wu
    University of Melbourne, Melbourne, VIC 3010 Australia.
  • Na Li
    School of Nursing, Fujian University of Traditional Chinese Medicine, Fuzhou, China.
  • Liu Chao
    School of Life Sciences, Jiangsu Normal University, Xuzhou, China.
  • Fan-Lai Meng
    Department of Pathology, The Suqian Affiliated Hospital of Xuzhou Medical University, Suqian, China.
  • Hao Lu
    Huazhong University of Science and Technology, Wuhan, China.
  • Zhen-Duo Shi
    Department of Urology, Xuzhou Central Hospital, Jiefang South Road, No. 199, Xuzhou, Jiangsu, China.
  • Zhi-Gang Jia
    School of Mathematics and Statistics and Jiangsu Key Laboratory of Education Big Data Science and Engineering, Jiangsu Normal University, No.101, Shanghai Road, Tangshan New District, Xuzhou, Jiangsu, China. zhgjia@jsnu.edu.cn.
  • Cong-Hui Han
    Department of Urology, Xuzhou Central Hospital, Jiefang South Road, No. 199, Xuzhou, Jiangsu, China. hanconghuidoctor@vip.qq.com.