Predictive performance of urinalysis for urine culture results according to causative microorganisms: an integrated analysis with artificial intelligence.

Journal: Journal of clinical microbiology
PMID:

Abstract

Urinary tract infections (UTIs) are pervasive and prevalent in both community and hospital settings. Recent trends in the changes of the causative microorganisms in these infections could affect the effectiveness of urinalysis (UA). We aimed to evaluate the predictive performance of UA for urinary culture test results according to the causative microorganisms. In addition, UA results were integrated with artificial intelligence (AI) methods to improve the predictive power. A total of 360,376 suspected UTI patients were enrolled from two university hospitals and one commercial laboratory. To ensure broad model applicability, only a limited range of clinical data available from commercial laboratories was used in the analyses. Overall, 53,408 (14.8%) patients were identified as having a positive urine culture. Among the UA tests, the combination of leukocyte esterase and nitrite tests showed the highest area under the curve (AUROC, 0.766; 95% CI, 0.764-0.768) for predicting urine culture positivity but performed poorly for Gram-positive bacteriuria (0.642; 0.637-0.647). The application of an AI model improved the predictive power of the model for urine culture results to an AUROC of 0.872 (0.870-0.875), and the model showed superior performance metrics not only for Gram-negative bacteriuria (0.901; 0.899-0.902) but also for Gram-positive bacteriuria (0.745; 0.740-0.749) and funguria (0.872; 0.865-0.879). As the prevalence of non--caused UTIs increases, the performance of UA in predicting UTIs could be compromised. The addition of AI technologies has shown potential for improving the predictive performance of UA for urine culture results.IMPORTANCEUA had good performance in predicting urine culture results caused by Gram-negative bacteria, especially for and bacteriuria, but had limitations in predicting urine culture results caused by Gram-positive bacteria, including and . We developed and externally validated an AI model incorporating minimal demographic information of patients (age and sex) and laboratory data for UA, complete blood count, and serum creatinine concentrations. The AI model exhibited improved performance in predicting urine culture results across all the causative microorganisms, including Gram-positive bacteria, Gram-negative bacteria, and fungi.

Authors

  • Min Hyuk Choi
    Department of Laboratory Medicine, Yonsei University College of Medicine, Seoul, Korea.
  • Dokyun Kim
    Department of Laboratory Medicine, Gangnam Severance Hospital, Yonsei University College of Medicine, 211 Eonju-ro, Gangnam-gu, Seoul 06273, South Korea; Research Institute of Bacterial Resistance, Yonsei University College of Medicine, Seoul, South Korea. Electronic address: kyunsky@yuhs.ac.
  • Hye Gyung Bae
    Seoul Clinical Laboratories, Yongin-si, South Korea.
  • Ae-Ran Kim
    Seoul Clinical Laboratories, Yongin-si, South Korea.
  • Mikyeong Lee
    Seoul Clinical Laboratories, Yongin-si, South Korea.
  • Kyungwon Lee
    Department of Digital Media, Ajou University, Wonchun-dong, Yeongtong-gu, 443-749, Suwon, South Korea.
  • Kyoung-Ryul Lee
    Seoul Clinical Laboratories, Yongin-si, South Korea.
  • Seok Hoon Jeong
    Department of Laboratory Medicine, Gangnam Severance Hospital, Yonsei University College of Medicine, 211 Eonju-ro, Gangnam-gu, Seoul 06273, South Korea; Research Institute of Bacterial Resistance, Yonsei University College of Medicine, Seoul, South Korea.